Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g009620.2.1 | Tomato | plastid | 61.11 | 89.8 |
| KRH75408 | Soybean | cytosol | 54.86 | 53.02 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 57.64 | 48.82 |
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 49.31 | 47.65 |
| Bra004025.1-P | Field mustard | cytosol, extracellular, plasma membrane | 34.72 | 44.25 |
| PGSC0003DMT400040788 | Potato | cytosol | 20.14 | 43.94 |
| AT1G68630.1 | Thale cress | cytosol | 47.22 | 42.24 |
| Bra004328.1-P | Field mustard | plasma membrane | 45.83 | 40.99 |
| CDX96000 | Canola | plasma membrane | 45.83 | 40.99 |
| CDY38607 | Canola | plasma membrane | 45.83 | 40.99 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 40.97 | 40.97 |
| Os06t0520733-00 | Rice | extracellular | 31.94 | 40.71 |
| CDY07373 | Canola | cytosol | 43.75 | 39.13 |
| CDY04241 | Canola | cytosol | 43.75 | 39.13 |
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 30.56 | 36.67 |
| PGSC0003DMT400081921 | Potato | cytosol, plasma membrane, plastid | 40.97 | 35.98 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 40.28 | 31.18 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 40.97 | 31.05 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 38.19 | 30.05 |
| PGSC0003DMT400072265 | Potato | mitochondrion | 27.78 | 21.28 |
| PGSC0003DMT400014354 | Potato | cytosol, endoplasmic reticulum, nucleus | 37.5 | 12.62 |
| PGSC0003DMT400014896 | Potato | nucleus, plastid | 20.83 | 7.92 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400033759 | EnsemblPlantsGene:PGSC0003DMG400012970 | EntrezGene:102590380 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF65 | PFAM:PF04749 | PGSC:PGSC0003DMG400012970 | RefSeq:XP_006362555.1 |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000296A3C4 | UniProt:M1AZM1 | MapMan:35.1 | : |
Description
PGPS/D12 [Source:PGSC_GENE;Acc:PGSC0003DMG400012970]
Coordinates
chr5:-:2205646..2207232
Molecular Weight (calculated)
16315.6 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.344
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTNNWPIGQ WTTDLFDCWD DPSLCVKTCF CPCVTIGEVV EMLDQGTTSK GHACLLAYAM GSIHCGWIYG RRYRRKLREM FKLPESPYSD TLISCCCCVC
101: GISQEYRELK NRGADPSLGW EGNAEKWKRE GVKVPPIPTS SMTR
101: GISQEYRELK NRGADPSLGW EGNAEKWKRE GVKVPPIPTS SMTR
001: MSEQEGKNEK KVTEGQWTTG LYDCLSEDIS TCCFTWVCPC VAFGRIAEIL DKGETSRGLA GLMVVAMSSI GCGWYYASKY RAKLRHQYAL PEAPCADGAI
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR
101: HCFCCPCALT QEHRELKHRG LDPSLGWNIE NGGLNSNTPP FVASGMDR
Arabidopsis Description
PCR9Protein PLANT CADMIUM RESISTANCE 9 [Source:UniProtKB/Swiss-Prot;Acc:P0CW98]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.