Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004025.1-P | Field mustard | cytosol, extracellular, plasma membrane | 38.82 | 58.41 |
| PGSC0003DMT400033759 | Potato | cytosol | 48.82 | 57.64 |
| KRH75408 | Soybean | cytosol | 48.24 | 55.03 |
| Solyc05g009620.2.1 | Tomato | plastid | 30.59 | 53.06 |
| AT1G68630.1 | Thale cress | cytosol | 48.82 | 51.55 |
| Bra004328.1-P | Field mustard | plasma membrane | 48.24 | 50.93 |
| CDX96000 | Canola | plasma membrane | 48.24 | 50.93 |
| CDY04241 | Canola | cytosol | 48.24 | 50.93 |
| CDY07373 | Canola | cytosol | 48.24 | 50.93 |
| CDY38607 | Canola | plasma membrane | 48.24 | 50.93 |
| VIT_01s0011g05440.t01 | Wine grape | plastid | 47.06 | 44.44 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 47.06 | 44.2 |
| VIT_01s0011g05430.t01 | Wine grape | plastid | 46.47 | 43.89 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 36.47 | 43.06 |
| Os06t0520733-00 | Rice | extracellular | 28.24 | 42.48 |
| VIT_01s0011g03250.t01 | Wine grape | cytosol | 15.29 | 41.27 |
| VIT_01s0011g05470.t01 | Wine grape | cytosol, plastid | 43.53 | 36.82 |
| VIT_01s0011g03260.t01 | Wine grape | plastid | 44.71 | 36.36 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 45.88 | 35.94 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 44.71 | 35.19 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 37.06 | 33.87 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 41.18 | 31.39 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 34.12 | 30.05 |
| VIT_01s0011g05420.t01 | Wine grape | cytosol | 44.71 | 27.54 |
| VIT_14s0006g03190.t01 | Wine grape | cytosol, nucleus, plastid | 45.29 | 24.44 |
| VIT_17s0000g03960.t01 | Wine grape | cytosol, nucleus, plastid | 42.94 | 23.32 |
| VIT_08s0040g00140.t01 | Wine grape | extracellular, plasma membrane, plastid | 17.65 | 21.28 |
Protein Annotations
| EntrezGene:100244124 | wikigene:100244124 | MapMan:35.1 | ProteinID:CBI27048 | ProteinID:CBI27048.3 | UniProt:D7T977 |
| EMBL:FN595752 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100244124 | wikigene:LOC100244124 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF65 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI00015C7D4D | ArrayExpress:VIT_01s0011g03240 | EnsemblPlantsGene:VIT_01s0011g03240 | EnsemblPlants:VIT_01s0011g03240.t01 | RefSeq:XP_002278907 | RefSeq:XP_002278907.1 |
| RefSeq:XP_019076434.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:2948265..2949046
Molecular Weight (calculated)
18122.9 Da
IEP (calculated)
6.851
GRAVY (calculated)
0.082
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPNNSINAP TSKSAVPVPV PVPAPAPAPN QVPEGQWSTG LWDCSEDPSN CFITCFCPCI TLGRVAEIID RGTPSCRVSG LIYYALGAVG CGWLFAGTYR
101: SKLRAMFSLP EAPCGDLLVH CCCCVCALCQ EYRELKNRGA DPSIGWQANV EKWDGAGIKV PPIAAPGMAR
101: SKLRAMFSLP EAPCGDLLVH CCCCVCALCQ EYRELKNRGA DPSIGWQANV EKWDGAGIKV PPIAAPGMAR
001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
Arabidopsis Description
PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.