Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47639 | Soybean | endoplasmic reticulum, extracellular | 33.33 | 72.83 |
| VIT_01s0011g05430.t01 | Wine grape | plastid | 56.22 | 62.78 |
| VIT_01s0011g05440.t01 | Wine grape | plastid | 56.22 | 62.78 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 57.21 | 60.53 |
| Solyc04g007900.2.1 | Tomato | nucleus | 55.72 | 60.22 |
| KRH60380 | Soybean | plastid | 55.22 | 59.68 |
| KRH41677 | Soybean | extracellular | 50.25 | 57.71 |
| KRH60379 | Soybean | cytosol, plastid, vacuole | 52.24 | 54.97 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 45.27 | 50.28 |
| VIT_01s0011g03260.t01 | Wine grape | plastid | 50.25 | 48.33 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 50.75 | 45.74 |
| VIT_01s0011g03250.t01 | Wine grape | cytosol | 13.93 | 44.44 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 36.82 | 43.53 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 46.77 | 43.32 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 45.27 | 42.13 |
| VIT_01s0011g05420.t01 | Wine grape | cytosol | 50.75 | 36.96 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 30.35 | 31.61 |
| VIT_14s0006g03190.t01 | Wine grape | cytosol, nucleus, plastid | 41.29 | 26.35 |
| VIT_17s0000g03960.t01 | Wine grape | cytosol, nucleus, plastid | 40.3 | 25.88 |
| VIT_08s0040g00140.t01 | Wine grape | extracellular, plasma membrane, plastid | 16.42 | 23.4 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 6.97 | 12.61 |
Protein Annotations
| EntrezGene:100250939 | wikigene:100250939 | MapMan:35.1 | ProteinID:CBI26853 | ProteinID:CBI26853.3 | UniProt:D7T8N2 |
| EMBL:FN595752 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100250939 | wikigene:LOC100250939 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF96 | TIGR:TC52723 | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI000198288E | ArrayExpress:VIT_01s0011g05470 | EnsemblPlantsGene:VIT_01s0011g05470 | EnsemblPlants:VIT_01s0011g05470.t01 | unigene:Vvi.6753 |
| RefSeq:XP_002284819 | RefSeq:XP_002284819.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:+:5123104..5124396
Molecular Weight (calculated)
22048.3 Da
IEP (calculated)
6.936
GRAVY (calculated)
-0.295
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSSDDYRRF MTTPPPEPAP PSFNGAGTAT GIPVSSPEPS FSEKPSQAPL QPKVKAPRVP WSSGLCDCFS DPRNCCITCW CPCITFGQIA EIVDKGSSAC
101: GVNGALYTLI ACVTGCACCY SCFYRAKMRQ QYLLKPSPCG DCLVHCCCEY CSLCQEYREL KNRGFDMTIG WHGNVERQNR GVEMSSMSSQ TAPTMEEGMS
201: R
101: GVNGALYTLI ACVTGCACCY SCFYRAKMRQ QYLLKPSPCG DCLVHCCCEY CSLCQEYREL KNRGFDMTIG WHGNVERQNR GVEMSSMSSQ TAPTMEEGMS
201: R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.