Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77728 | Soybean | extracellular | 63.83 | 48.65 |
| Solyc10g081410.1.1 | Tomato | cytosol | 63.12 | 47.34 |
| PGSC0003DMT400072265 | Potato | mitochondrion | 63.12 | 47.34 |
| GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 62.41 | 46.81 |
| KRH27778 | Soybean | extracellular, nucleus, plasma membrane | 62.41 | 46.81 |
| AT2G40935.9 | Thale cress | cytosol | 62.41 | 46.32 |
| CDY57571 | Canola | cytosol | 60.99 | 44.79 |
| Zm00001d008282_P003 | Maize | cytosol, extracellular, plasma membrane | 58.16 | 44.57 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 58.16 | 44.57 |
| TraesCS3A01G184200.2 | Wheat | extracellular | 58.16 | 44.57 |
| HORVU3Hr1G037940.1 | Barley | cytosol | 58.16 | 44.57 |
| Bra016960.1-P | Field mustard | cytosol | 60.99 | 44.56 |
| EES02743 | Sorghum | cytosol | 57.45 | 44.26 |
| CDY06953 | Canola | cytosol | 60.28 | 44.04 |
| CDY57415 | Canola | cytosol | 60.28 | 44.04 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 57.45 | 44.02 |
| CDY53672 | Canola | cytosol | 58.16 | 43.85 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 41.13 | 37.91 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 36.88 | 35.37 |
| VIT_01s0011g03260.t01 | Wine grape | plastid | 26.24 | 17.7 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 22.7 | 17.68 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 21.28 | 17.65 |
| VIT_01s0011g05430.t01 | Wine grape | plastid | 21.99 | 17.22 |
| VIT_01s0011g05440.t01 | Wine grape | plastid | 21.28 | 16.67 |
| VIT_01s0011g05470.t01 | Wine grape | cytosol, plastid | 23.4 | 16.42 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 23.4 | 15.28 |
| VIT_01s0011g05450.t01 | Wine grape | mitochondrion | 24.11 | 15.25 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 22.7 | 14.75 |
| VIT_09s0002g04180.t01 | Wine grape | cytosol | 16.31 | 11.92 |
| VIT_01s0011g05420.t01 | Wine grape | cytosol | 21.28 | 10.87 |
| VIT_17s0000g03960.t01 | Wine grape | cytosol, nucleus, plastid | 24.11 | 10.86 |
| VIT_14s0006g03190.t01 | Wine grape | cytosol, nucleus, plastid | 24.11 | 10.79 |
| VIT_01s0011g03250.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_08s0040g00140 | EMBL:AM477006 | EMBL:FN596008 | EnsemblPlants:VIT_08s0040g00140.t01 | EnsemblPlantsGene:VIT_08s0040g00140 | EntrezGene:100264543 |
| EntrezGene:LOC100264543 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PFAM:PF04749 | ProteinID:CAN70759 | ProteinID:CAN70759.1 |
| ProteinID:CCB57168 | ProteinID:CCB57168.1 | RefSeq:XP_002265259 | RefSeq:XP_002265259.1 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI00021082C8 | UniProt:F6HQT7 | wikigene:100264543 | wikigene:LOC100264543 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr8:+:11077950..11085699
Molecular Weight (calculated)
15357.5 Da
IEP (calculated)
6.463
GRAVY (calculated)
0.110
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGQGSYVPP PYIPLGQSDS EVEIVPHDSD LPDHRHTSDS PSQWSSGICA CCDDMQSCCI GFFCPCFLFA KNAEFLGSGT LAGSCMTHLI FWALVNTVCC
101: LLSDGTLLGL PGCFVACYAC GYRRALRSKY NLQILRKTEA K
101: LLSDGTLLGL PGCFVACYAC GYRRALRSKY NLQILRKTEA K
001: MKEKKGHYVP PSYIPLTQSD ADTEVETTTP NLEIAVSEST KDDPRQWSSG ICACFDDMQS CCVGLFCPCY IFGKNAELLG SGTFAGPCLT HCISWALVNT
101: ICCFATNGAL LGLPGCFVSC YACGYRKSLR AKYNLQEAPC GDFVTHFFCH LCAICQEYRE IREQSSGSYP LDMKMAITNA PLAQTMESAN
101: ICCFATNGAL LGLPGCFVSC YACGYRKSLR AKYNLQEAPC GDFVTHFFCH LCAICQEYRE IREQSSGSYP LDMKMAITNA PLAQTMESAN
Arabidopsis Description
PCR10Protein PLANT CADMIUM RESISTANCE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.