Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 4
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G037940.1 | Barley | cytosol | 69.15 | 70.65 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 68.62 | 70.11 |
| TraesCS3A01G184200.2 | Wheat | extracellular | 68.62 | 70.11 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 68.09 | 69.57 |
| EES02743 | Sorghum | cytosol | 67.55 | 69.4 |
| Zm00001d008282_P003 | Maize | cytosol, extracellular, plasma membrane | 67.55 | 69.02 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 55.32 | 67.97 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 52.66 | 67.35 |
| Solyc10g081410.1.1 | Tomato | cytosol | 64.89 | 64.89 |
| PGSC0003DMT400072265 | Potato | mitochondrion | 63.3 | 63.3 |
| AT2G40935.9 | Thale cress | cytosol | 63.83 | 63.16 |
| VIT_08s0040g00140.t01 | Wine grape | extracellular, plasma membrane, plastid | 46.81 | 62.41 |
| KRH77728 | Soybean | extracellular | 60.64 | 61.62 |
| CDY57571 | Canola | cytosol | 60.64 | 59.38 |
| KRH27778 | Soybean | extracellular, nucleus, plasma membrane | 59.04 | 59.04 |
| CDY53672 | Canola | cytosol | 58.51 | 58.82 |
| Bra016960.1-P | Field mustard | cytosol | 60.11 | 58.55 |
| CDY57415 | Canola | cytosol | 59.57 | 58.03 |
| CDY06953 | Canola | cytosol | 59.57 | 58.03 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 29.26 | 31.43 |
| GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 30.32 | 31.32 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 27.66 | 30.95 |
| GSMUA_Achr7P18730_001 | Banana | cytosol, extracellular, plastid | 28.72 | 29.67 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 28.19 | 29.12 |
| GSMUA_AchrUn_... | Banana | plastid | 26.6 | 27.17 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 23.4 | 16.36 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 25.0 | 11.24 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P32110_001 | EnsemblPlants:GSMUA_Achr6T32110_001 | EnsemblPlantsGene:GSMUA_Achr6G32110_001 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI000295A715 | UniProt:M0TC06 | MapMan:35.1 |
Description
uncharacterized Cys-rich domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G32110_001]
Coordinates
chr6:+:31635242..31639580
Molecular Weight (calculated)
20132.1 Da
IEP (calculated)
5.510
GRAVY (calculated)
0.098
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGQGSYVPP PYIPLDQLDT EANSTPVNNG YSSHQSATRD LTQWSSGICA CFDDMQSCCV GAVCPCFLFG KNAEFLGSGT LAGSCMTHFI LWGLVNSLCC
101: LFTGGLLAAV PGSMVACYAC GYRKTLRAKF NLQEAPCGDL TTHLFCHLCA ICQEYREIRE RSSGSDPSMM SSAVAAPAVQ TMELAPHE
101: LFTGGLLAAV PGSMVACYAC GYRKTLRAKF NLQEAPCGDL TTHLFCHLCA ICQEYREIRE RSSGSDPSMM SSAVAAPAVQ TMELAPHE
001: MKEKKGHYVP PSYIPLTQSD ADTEVETTTP NLEIAVSEST KDDPRQWSSG ICACFDDMQS CCVGLFCPCY IFGKNAELLG SGTFAGPCLT HCISWALVNT
101: ICCFATNGAL LGLPGCFVSC YACGYRKSLR AKYNLQEAPC GDFVTHFFCH LCAICQEYRE IREQSSGSYP LDMKMAITNA PLAQTMESAN
101: ICCFATNGAL LGLPGCFVSC YACGYRKSLR AKYNLQEAPC GDFVTHFFCH LCAICQEYRE IREQSSGSYP LDMKMAITNA PLAQTMESAN
Arabidopsis Description
PCR10Protein PLANT CADMIUM RESISTANCE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.