Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18730_001 | Banana | cytosol, extracellular, plastid | 52.17 | 52.75 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 46.74 | 51.19 |
| GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 50.54 | 51.1 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 47.28 | 49.71 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 45.11 | 45.6 |
| GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 27.17 | 26.6 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 19.57 | 23.53 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 30.98 | 21.19 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 34.78 | 15.31 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP18030_001 | EnsemblPlants:GSMUA_AchrUn_randomT18030_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG18030_001 | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030154 | GO:GO:0048235 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 | SEG:seg | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI000295653E | UniProt:M0UA62 | MapMan:35.1 | : | : |
Description
Uncharacterized protein At1g14870 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18030_001]
Coordinates
chrchrUn_random:+:85088472..85089671
Molecular Weight (calculated)
19731.7 Da
IEP (calculated)
5.071
GRAVY (calculated)
0.116
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAPQVGDYH GPQPVPPVAA APAASSSFRN DVYPPAFAPS TPRAQPPLPA PWSTGLFDCC DDVGNCCVTC FCPCITFGQI AEIVDGGSVP CGASGALYAL
101: MFCVTGCACL YSCFYRSKMR GQLFLEESPC ADCAVHCCCE SCALCQEYRE LKIRGFNLHY WLLHGNLQVQ NATLPPSVEG GMQR
101: MFCVTGCACL YSCFYRSKMR GQLFLEESPC ADCAVHCCCE SCALCQEYRE LKIRGFNLHY WLLHGNLQVQ NATLPPSVEG GMQR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.