Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18750_001 | Banana | cytosol, extracellular, plasma membrane | 77.47 | 77.47 |
| GSMUA_Achr9P27300_001 | Banana | cytosol, plastid, vacuole | 53.3 | 55.43 |
| GSMUA_Achr7P18760_001 | Banana | cytosol, extracellular, mitochondrion | 51.1 | 55.36 |
| GSMUA_AchrUn_... | Banana | plastid | 52.75 | 52.17 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 48.35 | 48.35 |
| GSMUA_Achr6P32110_001 | Banana | extracellular, peroxisome, plasma membrane | 29.67 | 28.72 |
| GSMUA_Achr9P05180_001 | Banana | endoplasmic reticulum, extracellular | 21.43 | 25.49 |
| GSMUA_Achr5P22960_001 | Banana | plastid | 36.26 | 24.54 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 36.81 | 16.03 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P18730_001 | EnsemblPlants:GSMUA_Achr7T18730_001 | EnsemblPlantsGene:GSMUA_Achr7G18730_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF98 | PFAM:PF04749 | SEG:seg | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI000295697E | UniProt:M0TIR0 | MapMan:35.1 | : | : |
Description
Uncharacterized protein At1g14870 [Source:GMGC_GENE;Acc:GSMUA_Achr7G18730_001]
Coordinates
chr7:-:21569364..21570403
Molecular Weight (calculated)
19814.0 Da
IEP (calculated)
7.359
GRAVY (calculated)
-0.011
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPSKPDPYY PPPPQSTGSY YPAAPPTTGV PVPLAPGVFH IQAPVTGPWS TGLCHCCDDV GNCCITCFCP CITFGQIAEI IDKGSTSCGV SGALYALLAS
101: VTFCPCFYSC FYRSKLRRQY GLKEKPCADC LVHCCCCECC SLCQMYRELK RRGFDMSIGW HANMERQGET ATLPPPVQSM SG
101: VTFCPCFYSC FYRSKLRRQY GLKEKPCADC LVHCCCCECC SLCQMYRELK RRGFDMSIGW HANMERQGET ATLPPPVQSM SG
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.