CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008282_P003	Maize	cytosol, extracellular, plasma membrane	93.99	93.48
TraesCS3D01G188300.1	Wheat	extracellular	89.62	89.13
TraesCS3A01G184200.2	Wheat	extracellular	89.62	89.13
TraesCS3B01G214000.1	Wheat	cytosol	88.52	88.04
HORVU3Hr1G037940.1	Barley	cytosol	87.98	87.5
Os01t0267400-01	Rice	cytosol, extracellular, plastid	66.67	82.99
GSMUA_Achr6P32110_001	Banana	extracellular, peroxisome, plasma membrane	69.4	67.55
Solyc10g081410.1.1	Tomato	cytosol	60.66	59.04
GSMUA_Achr9P05180_001	Banana	endoplasmic reticulum, extracellular	49.18	58.82
PGSC0003DMT400072265	Potato	mitochondrion	60.11	58.51
VIT_08s0040g00140.t01	Wine grape	extracellular, plasma membrane, plastid	44.26	57.45
KRH77728	Soybean	extracellular	57.38	56.76
KRH27778	Soybean	extracellular, nucleus, plasma membrane	57.92	56.38
CDY53672	Canola	cytosol	55.19	54.01
AT2G40935.9	Thale cress	cytosol	55.74	53.68
Bra016960.1-P	Field mustard	cytosol	55.74	52.85
CDY57571	Canola	cytosol	55.19	52.6
CDY57415	Canola	cytosol	55.19	52.33
CDY06953	Canola	cytosol	55.19	52.33
EES12297	Sorghum	extracellular	32.24	38.31
OQU84365	Sorghum	cytosol, plastid, vacuole	24.59	36.59
OQU90679	Sorghum	endoplasmic reticulum, extracellular	28.96	35.81
EER90575	Sorghum	cytosol, extracellular, mitochondrion	30.6	33.33
EER90573	Sorghum	extracellular	30.6	32.37
EES07039	Sorghum	cytosol, extracellular, mitochondrion	28.96	29.28
EES05849	Sorghum	plastid	28.42	27.66

Protein Annotations

MapMan:35.1	EntrezGene:8054633	UniProt:C5XGK2	ProteinID:EES02742.2	EnsemblPlants:EES02743	ProteinID:EES02743
ProteinID:EES02743.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015174	GO:GO:0016020	GO:GO:0016021	GO:GO:1990822	ProteinID:OQU86670.1	ProteinID:OQU86671.1
PFAM:PF04749	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	EnsemblPlantsGene:SORBI_3003G125100	unigene:Sbi.20825	TIGRFAMs:TIGR01571
TMHMM:TMhelix	UniParc:UPI0001A84F0B	RefSeq:XP_002457623.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:11358542..11362610

Molecular Weight (calculated)

19590.4 Da

IEP (calculated)

5.886

GRAVY (calculated)

0.001

Length

183 amino acids

Sequence
(BLAST)

001: MAGKGYVPPQ YIPLYGVDTE DDHVPAVEEN HAARHKLNRD LTQWSSGICA CFDDPQSCCI GATCPCFLFG KNAQFLGSGT LAGSCTTHCM LWGLLTSLCC
101: VFTGGLVLAV PGSAVACYAC GYRSALRTKY NLPEAPCGDL TTHLFCHLCA ICQEYREIRE RTGSGSSSAP NVTPPPVQTM DEP

Best Arabidopsis Sequence Match ( AT2G40935.8 )
(BLAST)

001: MKEKKGHYVP PSYIPLTQSD ADTEVETTTP NLEIAVSEST KDDPRQWSSG ICACFDDMQS CCVGLFCPCY IFGKNAELLG SGTFAGPCLT HCISWALVNT
101: ICCFATNGAL LGLPGCFVSC YACGYRKSLR AKYNLQEAPC GDFVTHFFCH LCAICQEYRE IREQSSGSYP LDMKMAITNA PLAQTMESAN

Arabidopsis Description

PCR10Protein PLANT CADMIUM RESISTANCE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.