Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012906_P001 | Maize | cytosol, extracellular, mitochondrion | 83.93 | 84.43 |
| OQU90679 | Sorghum | endoplasmic reticulum, extracellular | 62.5 | 70.95 |
| Os03t0830200-00 | Rice | extracellular | 59.52 | 66.67 |
| Os03t0830400-01 | Rice | extracellular | 57.14 | 64.86 |
| Os03t0830500-01 | Rice | plasma membrane | 54.17 | 64.54 |
| EER90573 | Sorghum | extracellular | 57.74 | 56.07 |
| OQU84365 | Sorghum | cytosol, plastid, vacuole | 39.88 | 54.47 |
| EES12297 | Sorghum | extracellular | 46.43 | 50.65 |
| EES07039 | Sorghum | cytosol, extracellular, mitochondrion | 48.81 | 45.3 |
| EES05849 | Sorghum | plastid | 46.43 | 41.49 |
| EES02743 | Sorghum | cytosol | 33.33 | 30.6 |
Protein Annotations
| EnsemblPlants:EER90575 | EnsemblPlantsGene:SORBI_3001G024700 | EntrezGene:8079674 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 |
| PFAM:PF04749 | ProteinID:EER90575 | ProteinID:EER90575.1 | RefSeq:XP_002463577.1 | SEG:seg | TIGRFAMs:TIGR01571 |
| UniParc:UPI0001A825CB | UniProt:C5WU02 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:1946274..1947436
Molecular Weight (calculated)
18033.5 Da
IEP (calculated)
4.663
GRAVY (calculated)
0.178
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPDAAPYEA APGGVVVAPV AGLFPGAGAS REWSSGLFDC FDDFDTCCLT FWCPCITFGR TAEIVDHGTT SCGTSGALFA LIEYLSGTWC TWAYSCTYRG
101: RMRAQHGLPE APCADFLVHL CCLPCALCQE YRELKARGYE PVLGWEFNAQ RAAAGVAMSA PAVQGMGR
101: RMRAQHGLPE APCADFLVHL CCLPCALCQE YRELKARGYE PVLGWEFNAQ RAAAGVAMSA PAVQGMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.