Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90575 | Sorghum | cytosol, extracellular, mitochondrion | 70.95 | 62.5 |
| Os03t0830200-00 | Rice | extracellular | 62.16 | 61.33 |
| Os03t0830500-01 | Rice | plasma membrane | 58.11 | 60.99 |
| Os03t0830400-01 | Rice | extracellular | 60.81 | 60.81 |
| EER90573 | Sorghum | extracellular | 64.86 | 55.49 |
| OQU84365 | Sorghum | cytosol, plastid, vacuole | 41.22 | 49.59 |
| EES12297 | Sorghum | extracellular | 50.68 | 48.7 |
| EES07039 | Sorghum | cytosol, extracellular, mitochondrion | 58.78 | 48.07 |
| EES05849 | Sorghum | plastid | 45.27 | 35.64 |
| EES02743 | Sorghum | cytosol | 35.81 | 28.96 |
Protein Annotations
| EnsemblPlants:OQU90679 | EnsemblPlantsGene:SORBI_3001G024800 | EntrezGene:8079675 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 |
| PFAM:PF04749 | ProteinID:OQU90679 | ProteinID:OQU90679.1 | RefSeq:XP_002463578.1 | SEG:seg | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI0001A825CC | UniProt:A0A1Z5S4D8 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr1:+:1948990..1950281
Molecular Weight (calculated)
16207.7 Da
IEP (calculated)
6.664
GRAVY (calculated)
0.222
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPVVGFP VAGALRQQWS SGLFDCLDDC HICCLTYWCP CITFGRIAEM VDRGATSCGT SGALYAVIAC LTASQCTWVY SCTYRAMMRA QFGLPEAPCA
101: DCLVHLCCEP CALCQQYREL TARGLDPVHG WDFNAAMYPP PTQGMRRR
101: DCLVHLCCEP CALCQQYREL TARGLDPVHG WDFNAAMYPP PTQGMRRR
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Arabidopsis Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
SUBAcon: [extracellular,vacuole,cytosol]
SUBAcon: [extracellular,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.