Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0830400-01 | Rice | extracellular | 87.23 | 83.11 |
| Os03t0830200-00 | Rice | extracellular | 81.56 | 76.67 |
| OQU90679 | Sorghum | endoplasmic reticulum, extracellular | 60.99 | 58.11 |
| Os02t0580000-02 | Rice | cytosol | 58.16 | 54.3 |
| EER90575 | Sorghum | cytosol, extracellular, mitochondrion | 64.54 | 54.17 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 60.99 | 53.09 |
| Zm00001d012906_P001 | Maize | cytosol, extracellular, mitochondrion | 60.28 | 50.9 |
| Os03t0829900-00 | Rice | extracellular | 45.39 | 47.06 |
| Os06t0520733-00 | Rice | extracellular | 37.59 | 46.9 |
| Os04t0461600-01 | Rice | cytosol | 52.48 | 41.34 |
| Os02t0763000-01 | Rice | plasma membrane | 52.48 | 40.88 |
| Os03t0830300-00 | Rice | extracellular | 42.55 | 36.14 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 47.52 | 36.02 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 34.04 | 32.65 |
| Os06t0266266-00 | Rice | mitochondrion | 48.94 | 29.61 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 9.22 | 11.71 |
Protein Annotations
| EMBL:AK071173 | EnsemblPlants:Os03t0830500-01 | EnsemblPlantsGene:Os03g0830500 | EntrezGene:4334663 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 |
| PANTHER:PTHR15907:SF59 | PFAM:PF04749 | ProteinID:AAO39868.1 | ProteinID:AAP46225.1 | ProteinID:ABF99698.1 | ProteinID:BAF13701.1 |
| ProteinID:BAS87193.1 | ProteinID:EAZ29161.1 | RefSeq:XP_015629298.1 | SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix |
| UniParc:UPI0000002CD5 | UniProt:Q850Y9 | MapMan:35.1 | : | : | : |
Description
FW2.2-like 7Similar to PGPS/D12. (Os03t0830500-01)
Coordinates
chr3:-:34883520..34884578
Molecular Weight (calculated)
15126.2 Da
IEP (calculated)
6.986
GRAVY (calculated)
0.177
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPSAAAWS TGLLDCFDDC GLCCMTCWCP CITFGRVAEM VDRGSTSCGT SGALYALLAT VTGCQFVYSC VYRGKMRAQY GLGDDAACAD CCVHFWCNKC
101: ALCQEYRELV ARGYDPKLGW DLNVQRGAAA AAAPAVQHMG R
101: ALCQEYRELV ARGYDPKLGW DLNVQRGAAA AAAPAVQHMG R
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.