Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 2
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0830200-00 | Rice | extracellular | 41.57 | 46.0 |
| Os03t0830400-01 | Rice | extracellular | 38.55 | 43.24 |
| Os03t0830500-01 | Rice | plasma membrane | 36.14 | 42.55 |
| Os06t0520733-00 | Rice | extracellular | 24.7 | 36.28 |
| Os02t0580000-02 | Rice | cytosol | 31.93 | 35.1 |
| Os02t0579800-01 | Rice | cytosol, extracellular, plastid | 33.73 | 34.57 |
| Os03t0829900-00 | Rice | extracellular | 24.7 | 30.15 |
| Os04t0461600-01 | Rice | cytosol | 31.33 | 29.05 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 30.72 | 27.42 |
| Os02t0763000-01 | Rice | plasma membrane | 28.31 | 25.97 |
| Os01t0267400-01 | Rice | cytosol, extracellular, plastid | 21.08 | 23.81 |
| Os06t0266266-00 | Rice | mitochondrion | 30.72 | 21.89 |
| Os02t0286933-00 | Rice | cytosol, nucleus, plastid | 8.43 | 12.61 |
Protein Annotations
| EnsemblPlants:Os03t0830300-00 | EnsemblPlantsGene:Os03g0830300 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| ProteinID:AAO39876.1 | ProteinID:AAP46255.1 | ProteinID:ABF99696.1 | ProteinID:BAS87191.1 | SEG:seg | TIGRFAMs:TIGR01571 |
| UniParc:UPI0000002CD7 | UniProt:Q850Y7 | MapMan:35.2 | : | : | : |
Description
FW2.2-like 8Similar to PGPS/D12. (Os03t0830300-00)
Coordinates
chr3:-:34873910..34874544
Molecular Weight (calculated)
18545.0 Da
IEP (calculated)
12.284
GRAVY (calculated)
-0.319
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPSAGAVT GVPIGSAAWS TGLCDCFDDC GLCCTTCWCP CITFGRVAEI VDRGSTSFGT GGALYALLCA FTGFQWMYLH LPRQDARPAR PRRRRLRRLL
101: RPLLLRVLRA VPGVPRARRP RLRPQARMAP QRRARRRCRR RRRRGTGRAA HGPLEKASLH ALSIPK
101: RPLLLRVLRA VPGVPRARRP RLRPQARMAP QRRARRRCRR RRRRGTGRAA HGPLEKASLH ALSIPK
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.