Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
- mitochondrion 3
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400033759 | Potato | cytosol | 89.8 | 61.11 |
| KRH75408 | Soybean | cytosol | 52.04 | 34.23 |
| VIT_01s0011g03240.t01 | Wine grape | extracellular, plastid | 53.06 | 30.59 |
| Solyc12g037950.1.1 | Tomato | extracellular | 45.92 | 30.2 |
| Zm00001d000070_P001 | Maize | cytosol, extracellular, plastid | 41.84 | 28.47 |
| Solyc12g013570.1.1 | Tomato | cytosol | 31.63 | 23.31 |
| Solyc01g005470.2.1 | Tomato | extracellular | 38.78 | 23.17 |
| Os06t0520733-00 | Rice | extracellular | 26.53 | 23.01 |
| Solyc04g007900.2.1 | Tomato | nucleus | 39.8 | 20.97 |
| Solyc02g090730.2.1 | Tomato | plastid | 34.69 | 20.86 |
| Os10t0112100-01 | Rice | cytosol, plasma membrane, plastid | 37.76 | 19.89 |
| Solyc03g120600.2.1 | Tomato | cytosol, peroxisome, plastid | 33.67 | 19.19 |
| Solyc06g066590.2.1 | Tomato | cytosol, nucleus, peroxisome | 33.67 | 18.03 |
| Solyc08g013920.2.1 | Tomato | cytosol, plasma membrane, plastid | 30.61 | 13.7 |
| Solyc08g013910.2.1 | Tomato | cytosol | 22.45 | 11.83 |
| Solyc10g081410.1.1 | Tomato | cytosol | 21.43 | 11.17 |
| Solyc03g119660.1.1 | Tomato | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 36.73 | 8.7 |
Protein Annotations
| EnsemblPlants:Solyc05g009620.2.1 | EnsemblPlantsGene:Solyc05g009620.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PLAC_motif_containing |
| PANTHER:PTHR15907 | PANTHER:PTHR15907:SF65 | PFAM:PF04749 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI0002766C51 |
| UniProt:K4BXD6 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:3820985..3821756
Molecular Weight (calculated)
11073.6 Da
IEP (calculated)
9.363
GRAVY (calculated)
-0.308
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAKGHACLV AYAMGSIHCG WIYGRRYRRK LREIFKLPES PYSDTLISCC CCVCGISQQY RELKNRGADP SIGWEGNVMK WKREGVTVPP IPTSSMTR
001: MYGNGPVFKA EGTSFRDQPY AEQLPQGLWT TGLCDCHEDA HICVQTAIMP CVSFAQNVEI VNRGTIPCMN AGLIHLALGF IGCSWLYAFP NRSRLREHFA
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
101: LPEEPCRDFL VHLFCTPCAI CQESRELKNR GADPSIGWLS NVEKWSREKV TPPIVVPGMI R
Arabidopsis Description
PCR12Protein PLANT CADMIUM RESISTANCE 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX26]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.