Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g013910.2.1 | Tomato | cytosol | 36.41 | 74.19 |
| PGSC0003DMT400040788 | Potato | cytosol | 4.49 | 25.76 |
| PGSC0003DMT400081921 | Potato | cytosol, plasma membrane, plastid | 9.23 | 21.34 |
| PGSC0003DMT400075916 | Potato | cytosol, endoplasmic reticulum, nucleus | 10.55 | 21.05 |
| PGSC0003DMT400033759 | Potato | cytosol | 7.92 | 20.83 |
| PGSC0003DMT400042614 | Potato | cytosol, mitochondrion, peroxisome | 10.03 | 20.77 |
| PGSC0003DMT400056038 | Potato | cytosol, extracellular, plastid | 7.92 | 20.13 |
| PGSC0003DMT400006535 | Potato | cytosol, extracellular, plastid | 5.54 | 17.5 |
| PGSC0003DMT400072265 | Potato | mitochondrion | 7.65 | 15.43 |
| PGSC0003DMT400014354 | Potato | cytosol, endoplasmic reticulum, nucleus | 12.4 | 10.98 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400014896 | EnsemblPlantsGene:PGSC0003DMG400005813 | EntrezGene:102596571 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 | PGSC:PGSC0003DMG400005813 | SEG:seg |
| TIGRFAMs:TIGR01571 | TMHMM:TMhelix | UniParc:UPI00029538EB | UniProt:M1A525 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005813]
Coordinates
chr8:+:5874434..5881505
Molecular Weight (calculated)
42716.3 Da
IEP (calculated)
8.159
GRAVY (calculated)
-0.306
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTTDGNNEN IPTSPSHQLS PKNSTQGDLS SQSLPPRSQS QNSMHRHLSP SSSSSSQNSM NESHSAIPAT TTPIMSNSIS SPPKNSLYGP PPPAQWSSLS
101: TRIPWPLIPP QHQPPPCHQP PMIPYYPPMG VPPPFPPHFP MPFPHDQFHS FHHPMLLGNN NNNINNTSNG QIYSQPWSTG LFDCFSDIKN SWWEAALMFG
201: LLEAFCCQAS LVFAWYHRVQ FRKKYNLMGN LFSEFAITLI CMRLVLCQNY RQLNKLGFDV ALGFTTCVCP CITSGQIAEI VSEGRTSCME GVIINMLLCC
301: LCCTTPLYTF YYRVKLRRKF KLEGNECLDC LIHTLCCYCA LCQEYRELHR QGFDPALGKS RCTKHSVKIT SFCKNNFLT
101: TRIPWPLIPP QHQPPPCHQP PMIPYYPPMG VPPPFPPHFP MPFPHDQFHS FHHPMLLGNN NNNINNTSNG QIYSQPWSTG LFDCFSDIKN SWWEAALMFG
201: LLEAFCCQAS LVFAWYHRVQ FRKKYNLMGN LFSEFAITLI CMRLVLCQNY RQLNKLGFDV ALGFTTCVCP CITSGQIAEI VSEGRTSCME GVIINMLLCC
301: LCCTTPLYTF YYRVKLRRKF KLEGNECLDC LIHTLCCYCA LCQEYRELHR QGFDPALGKS RCTKHSVKIT SFCKNNFLT
001: MGRPDQTPSP RMNNNFNPVF HAQSEQPVDE KRVLQAEQIY PNNGGVVNQP NQVPMRPGPP TYINQSATFN QPYGVSMAGP VHTQPSNWTS GLFDCMNDGE
101: NALITCCFPF VTFGQIAEVI DEGATSCGTA GMLYGLICCL FAIPCVYTCT FRTKLRSKYG LPDAPAPDWI THCFCEYCAL CQEYRELKNR GLDPSIGWIG
201: NVQKQRMGQQ QEMMAPPMGQ RMMG
101: NALITCCFPF VTFGQIAEVI DEGATSCGTA GMLYGLICCL FAIPCVYTCT FRTKLRSKYG LPDAPAPDWI THCFCEYCAL CQEYRELKNR GLDPSIGWIG
201: NVQKQRMGQQ QEMMAPPMGQ RMMG
Arabidopsis Description
PCR6Protein PLANT CADMIUM RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.