Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 3
- cytosol 1
- vacuole 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24480 | Canola | cytosol, extracellular, vacuole | 78.2 | 78.2 |
| CDX92238 | Canola | plasma membrane | 77.44 | 77.44 |
| Bra022323.1-P | Field mustard | cytosol, extracellular, plasma membrane | 73.68 | 60.87 |
| AT1G58320.1 | Thale cress | cytosol | 45.11 | 40.54 |
| AT1G68610.1 | Thale cress | cytosol | 48.12 | 40.0 |
| AT3G18460.1 | Thale cress | cytosol, extracellular, nucleus, plastid | 54.89 | 39.67 |
| AT5G35525.1 | Thale cress | cytosol | 44.36 | 38.82 |
| AT1G14870.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 42.86 | 37.5 |
| AT1G49030.1 | Thale cress | cytosol | 63.16 | 37.5 |
| AT3G18450.1 | Thale cress | plastid | 51.13 | 36.96 |
| AT1G14880.1 | Thale cress | cytosol | 36.84 | 32.45 |
| AT1G52200.1 | Thale cress | plastid | 43.61 | 30.53 |
| AT1G68630.1 | Thale cress | cytosol | 36.84 | 30.43 |
| AT2G40935.9 | Thale cress | cytosol | 33.83 | 23.68 |
Protein Annotations
| MapMan:35.1 | EntrezGene:821376 | ProteinID:AEE76101.1 | ArrayExpress:AT3G18470 | EnsemblPlantsGene:AT3G18470 | RefSeq:AT3G18470 |
| TAIR:AT3G18470 | RefSeq:AT3G18470-TAIR-G | EnsemblPlants:AT3G18470.1 | TAIR:AT3G18470.1 | EMBL:AY065153 | EMBL:AY081605 |
| Unigene:At.28577 | ProteinID:BAB01113.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_188476.1 |
| PFAM:PF04749 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF49 | UniProt:Q9LS43 | TIGRFAMs:TIGR01571 |
| TMHMM:TMhelix | UniParc:UPI00000A0BE9 | : | : | : | : |
Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
Coordinates
chr3:-:6334822..6335822
Molecular Weight (calculated)
14718.9 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.009
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.