Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G300700.1 | Wheat | plastid | 99.47 | 99.47 |
| TraesCS6B01G351700.1 | Wheat | plastid | 99.47 | 99.47 |
| Os02t0763000-01 | Rice | plasma membrane | 71.66 | 74.03 |
| EES05849 | Sorghum | plastid | 73.26 | 72.87 |
| Zm00001d052171_P001 | Maize | cytosol, mitochondrion, plastid | 71.12 | 70.37 |
| PGSC0003DMT400040788 | Potato | cytosol | 24.6 | 69.7 |
| GSMUA_Achr6P02280_001 | Banana | cytosol | 59.36 | 60.99 |
| Solyc02g090730.2.1 | Tomato | plastid | 49.2 | 56.44 |
| TraesCS4A01G365600.1 | Wheat | cytosol, extracellular, plastid | 44.38 | 53.55 |
| VIT_03s0063g00570.t01 | Wine grape | cytosol | 50.8 | 52.49 |
| TraesCS4A01G365700.1 | Wheat | cytosol, extracellular, mitochondrion | 42.78 | 50.96 |
| TraesCS7A01G515200.1 | Wheat | cytosol, extracellular, nucleus | 44.92 | 50.91 |
| TraesCS2A01G016100.1 | Wheat | extracellular | 39.04 | 50.0 |
| TraesCS1A01G390500.1 | Wheat | cytosol, extracellular, mitochondrion | 49.73 | 49.73 |
| TraesCS4A01G365500.1 | Wheat | extracellular | 41.71 | 49.37 |
| KRH50266 | Soybean | cytosol, peroxisome, plastid | 50.27 | 48.7 |
| TraesCS2A01G016000.1 | Wheat | endoplasmic reticulum, extracellular | 35.83 | 47.86 |
| TraesCS7A01G207600.1 | Wheat | cytosol | 17.11 | 47.06 |
| TraesCS7A01G207500.1 | Wheat | extracellular | 29.41 | 47.01 |
| TraesCS2A01G052000.1 | Wheat | cytosol, extracellular, plastid | 37.97 | 46.71 |
| KRH71150 | Soybean | cytosol | 48.66 | 46.67 |
| KRH71889 | Soybean | cytosol | 42.25 | 44.13 |
| VIT_03s0063g00550.t01 | Wine grape | cytosol | 50.27 | 43.52 |
| VIT_03s0063g00560.t01 | Wine grape | cytosol | 50.27 | 43.32 |
| TraesCS5A01G428100.1 | Wheat | plastid | 22.99 | 42.16 |
| TraesCS7A01G161300.1 | Wheat | cytosol, mitochondrion, plastid | 31.55 | 31.22 |
| TraesCS3A01G184200.2 | Wheat | extracellular | 28.34 | 28.8 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G321000.1 | EnsemblPlantsGene:TraesCS6A01G321000 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF95 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6A:-:555669610..555670985
Molecular Weight (calculated)
20361.3 Da
IEP (calculated)
6.473
GRAVY (calculated)
-0.274
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MYPTTPSDAY DRFSSGPPPT APPPQQQPTY NHAMNQSHHA RPAAGLARWS TGLFHCMDDP GNCLITCLCP CITFGQIADI VDRGTCSCAG SGAAYAAICA
101: TTGMGCLYSC VYRTKMRAHY DLDEGECPDF LVHWCCELCA LCQEYRELKN RGFDMGIGWD ANMERRNRGV TGGQVMGAPA TPVGMMR
101: TTGMGCLYSC VYRTKMRAHY DLDEGECPDF LVHWCCELCA LCQEYRELKN RGFDMGIGWD ANMERRNRGV TGGQVMGAPA TPVGMMR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.