Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- mitochondrion 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G017300.1 | Wheat | cytosol, extracellular, nucleus | 90.41 | 91.03 |
| TraesCS2B01G008100.1 | Wheat | extracellular | 89.04 | 89.66 |
| TraesCS2A01G016000.1 | Wheat | endoplasmic reticulum, extracellular | 62.33 | 65.0 |
| EES12297 | Sorghum | extracellular | 63.7 | 60.39 |
| TraesCS4A01G365600.1 | Wheat | cytosol, extracellular, plastid | 49.32 | 46.45 |
| TraesCS7A01G207500.1 | Wheat | extracellular | 36.99 | 46.15 |
| TraesCS7A01G207600.1 | Wheat | cytosol | 21.23 | 45.59 |
| TraesCS7A01G515200.1 | Wheat | cytosol, extracellular, nucleus | 50.68 | 44.85 |
| TraesCS1A01G390500.1 | Wheat | cytosol, extracellular, mitochondrion | 55.48 | 43.32 |
| TraesCS4A01G365700.1 | Wheat | cytosol, extracellular, mitochondrion | 46.58 | 43.31 |
| TraesCS5A01G428100.1 | Wheat | plastid | 30.14 | 43.14 |
| TraesCS4A01G365500.1 | Wheat | extracellular | 46.58 | 43.04 |
| TraesCS2A01G052000.1 | Wheat | cytosol, extracellular, plastid | 42.47 | 40.79 |
| TraesCS6A01G321000.1 | Wheat | plastid | 50.0 | 39.04 |
| KRH49878 | Soybean | endoplasmic reticulum | 39.04 | 35.85 |
| TraesCS7A01G161300.1 | Wheat | cytosol, mitochondrion, plastid | 39.73 | 30.69 |
| TraesCS3A01G184200.2 | Wheat | extracellular | 34.25 | 27.17 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G016100.1 | EnsemblPlantsGene:TraesCS2A01G016100 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| PFscan:PS51257 | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:7380550..7387205
Molecular Weight (calculated)
15867.5 Da
IEP (calculated)
7.670
GRAVY (calculated)
0.233
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNVNGAA WSTGLCGCCD DVGSGCFLTW CFPCITFGRI AEIVDEGEIP CCASGSLYVL MCMTTGLGMG LYSCFYRYKL RRAYGLAEKP CADCCVHFFC
101: GACALCQGYR ELKNRGFQMH LGWQANAARM GMGMTVAPHV DPGMTR
101: GACALCQGYR ELKNRGFQMH LGWQANAARM GMGMTVAPHV DPGMTR
001: MEAQLHAKPH AQGEWSTGFC DCFSDCRNCC ITLCCPCITF GQVAEIVDRG SKSCCAAGAL YMLIDLITSC GRMYACFYSG KMRAQYNIKG DGCTDCLKHF
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
Arabidopsis Description
PCR1Protein PLANT CADMIUM RESISTANCE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.