Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G008100.1 | Wheat | extracellular | 92.41 | 92.41 |
| TraesCS2A01G016100.1 | Wheat | extracellular | 91.03 | 90.41 |
| TraesCS2D01G017200.1 | Wheat | extracellular | 41.38 | 69.77 |
| TraesCS5D01G436100.1 | Wheat | extracellular | 64.83 | 67.14 |
| TraesCS7D01G522100.1 | Wheat | endoplasmic reticulum, extracellular | 63.45 | 66.67 |
| EES12297 | Sorghum | extracellular | 66.21 | 62.34 |
| TraesCS2D01G325100.1 | Wheat | endoplasmic reticulum, extracellular | 40.69 | 61.46 |
| TraesCS3D01G494900.1 | Wheat | extracellular | 40.69 | 50.0 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 46.9 | 49.63 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 51.03 | 47.44 |
| TraesCS5D01G507700.1 | Wheat | cytosol, extracellular, plastid | 49.66 | 46.45 |
| TraesCS2D01G017100.1 | Wheat | cytosol, extracellular, plastid | 42.76 | 45.93 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 49.66 | 45.57 |
| TraesCS7D01G210000.1 | Wheat | extracellular | 43.45 | 45.32 |
| TraesCS2D01G052000.1 | Wheat | cytosol | 46.9 | 44.74 |
| TraesCS7D01G505600.1 | Wheat | cytosol, nucleus, vacuole | 51.03 | 44.31 |
| TraesCS1D01G398700.1 | Wheat | cytosol, extracellular, mitochondrion | 55.86 | 43.78 |
| TraesCS5D01G507600.1 | Wheat | plastid | 50.34 | 41.71 |
| TraesCS6D01G300700.1 | Wheat | plastid | 51.72 | 40.11 |
| KRH49878 | Soybean | endoplasmic reticulum | 38.62 | 35.22 |
| TraesCS7D01G162600.1 | Wheat | cytosol, peroxisome, plastid | 41.38 | 34.09 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 35.17 | 27.72 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G017300.1 | EnsemblPlantsGene:TraesCS2D01G017300 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:8337292..8338914
Molecular Weight (calculated)
16088.5 Da
IEP (calculated)
6.674
GRAVY (calculated)
0.074
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNVNGAS WSTGLWDCCD DVGGCFLTWC FPCITFGRIA EIVDEGEIPC CASGSLYVLL CMTTGLGMGL YSCFYRYKLR KAYELAEKPC ADCCVHFFCG
101: ACALCQEYRE LKNRGFHMHL GWQANVERMG KGTTVAPQVD PGMTR
101: ACALCQEYRE LKNRGFHMHL GWQANVERMG KGTTVAPQVD PGMTR
001: MASQHLQANP HAEGEWSTGF CDCFSDCQNC CITWLCPCIT FGQVADIVDR GNTSCGTAGA LYVLLAAITG CGCLYSCIYR GKIRAQYNIR GDGCTDCLKH
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
101: FCCELCALTQ EYRELKHRGF DMSLGWAGNV EKQQNQGGVA MGAPAFQGGM SR
Arabidopsis Description
PCR3Protein PLANT CADMIUM RESISTANCE 3 [Source:UniProtKB/Swiss-Prot;Acc:P0CW97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.