Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G147400.1 | Wheat | extracellular, golgi | 72.59 | 68.53 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 68.15 | 64.34 |
| TraesCS5D01G436100.1 | Wheat | extracellular | 48.89 | 47.14 |
| TraesCS7D01G522100.1 | Wheat | endoplasmic reticulum, extracellular | 44.44 | 43.48 |
| TraesCS2D01G017300.1 | Wheat | cytosol, extracellular, nucleus | 45.93 | 42.76 |
| EES12297 | Sorghum | extracellular | 47.41 | 41.56 |
| TraesCS3D01G494900.1 | Wheat | extracellular | 34.07 | 38.98 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 34.81 | 34.31 |
| TraesCS2D01G017200.1 | Wheat | extracellular | 21.48 | 33.72 |
| TraesCS7D01G210000.1 | Wheat | extracellular | 34.07 | 33.09 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 37.78 | 32.69 |
| KRH49878 | Soybean | endoplasmic reticulum | 37.78 | 32.08 |
| TraesCS2D01G052000.1 | Wheat | cytosol | 35.56 | 31.58 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 36.3 | 31.01 |
| TraesCS5D01G507700.1 | Wheat | cytosol, extracellular, plastid | 35.56 | 30.97 |
| TraesCS1D01G398700.1 | Wheat | cytosol, extracellular, mitochondrion | 41.48 | 30.27 |
| TraesCS5D01G507600.1 | Wheat | plastid | 37.78 | 29.14 |
| TraesCS7D01G505600.1 | Wheat | cytosol, nucleus, vacuole | 34.81 | 28.14 |
| TraesCS2D01G325100.1 | Wheat | endoplasmic reticulum, extracellular | 20.0 | 28.12 |
| TraesCS6D01G300700.1 | Wheat | plastid | 34.07 | 24.6 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 31.11 | 22.83 |
| TraesCS7D01G162600.1 | Wheat | cytosol, peroxisome, plastid | 28.89 | 22.16 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G017100.1 | EnsemblPlantsGene:TraesCS2D01G017100 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:8301440..8302585
Molecular Weight (calculated)
14337.4 Da
IEP (calculated)
8.334
GRAVY (calculated)
0.081
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGHRNKVSW SSGLCGCFDD LGGCCLTLFC PCITFGRIAE IVDKGAISCC ASGTMHVLQG LGTSAIGSIL YHCCDRARLR AEHGLEEKPC ADCCTPSAGI
101: VPSARSIASS RVAALTCRRD GMPTWRGWGR LSRPR
101: VPSARSIASS RVAALTCRRD GMPTWRGWGR LSRPR
001: MNLSSNDQPS QGRIKAKDWS TDLCECWMDI NSCCLTCWCP CVAFGRIAEV VDRGSTSCGV SGAMYMIIFM LTGYGGSSLY SCFYRTKLRA QYNLKERPCC
101: DCCVHFCCEP CALCQEYRQL QHNRDLDLVI GWHGNMERHA RLAASTPSAP PLQAPMSRLV
101: DCCVHFCCEP CALCQEYRQL QHNRDLDLVI GWHGNMERHA RLAASTPSAP PLQAPMSRLV
Arabidopsis Description
PCR11Protein PLANT CADMIUM RESISTANCE 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.