Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G066300.1 | Wheat | cytosol, peroxisome, plastid | 93.75 | 88.71 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 89.2 | 84.41 |
| TraesCS7A01G161300.1 | Wheat | cytosol, mitochondrion, plastid | 89.2 | 83.07 |
| TraesCS7D01G522100.1 | Wheat | endoplasmic reticulum, extracellular | 34.66 | 44.2 |
| TraesCS2D01G017200.1 | Wheat | extracellular | 21.59 | 44.19 |
| TraesCS2D01G325100.1 | Wheat | endoplasmic reticulum, extracellular | 22.73 | 41.67 |
| TraesCS3D01G494900.1 | Wheat | extracellular | 27.84 | 41.53 |
| TraesCS5D01G436100.1 | Wheat | extracellular | 32.95 | 41.43 |
| TraesCS2D01G017300.1 | Wheat | cytosol, extracellular, nucleus | 34.09 | 41.38 |
| TraesCS5D01G507700.1 | Wheat | cytosol, extracellular, plastid | 34.09 | 38.71 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 30.11 | 38.69 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 33.52 | 37.34 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 32.95 | 37.18 |
| TraesCS7D01G210000.1 | Wheat | extracellular | 28.41 | 35.97 |
| TraesCS7D01G505600.1 | Wheat | cytosol, nucleus, vacuole | 33.52 | 35.33 |
| TraesCS2D01G052000.1 | Wheat | cytosol | 29.55 | 34.21 |
| TraesCS1D01G398700.1 | Wheat | cytosol, extracellular, mitochondrion | 35.23 | 33.51 |
| TraesCS5D01G507600.1 | Wheat | plastid | 32.95 | 33.14 |
| TraesCS6D01G300700.1 | Wheat | plastid | 31.25 | 29.41 |
| TraesCS2D01G017100.1 | Wheat | cytosol, extracellular, plastid | 22.16 | 28.89 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 26.7 | 25.54 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G162600.1 | EnsemblPlantsGene:TraesCS7D01G162600 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:-:112432863..112433666
Molecular Weight (calculated)
19695.3 Da
IEP (calculated)
5.188
GRAVY (calculated)
-0.154
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGVDASQD LQLPARVQGD GHDTGVVIRQ SVEAVPVRQG WQTGLFDCED DGCDAFCCSV WFPCAAFACV ADIVDQGSDG RCVHFTCYLG AAYFGLWWVY
101: TGWYRRKLRE QYGLPETPLP DCLTHLLCHW CALAQEYREL ARRGFNVDQG WEGRPRPATA PAATTVPRVQ VPMTRL
101: TGWYRRKLRE QYGLPETPLP DCLTHLLCHW CALAQEYREL ARRGFNVDQG WEGRPRPATA PAATTVPRVQ VPMTRL
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Arabidopsis Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
SUBAcon: [extracellular,vacuole,cytosol]
SUBAcon: [extracellular,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.