Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G162600.1 | Wheat | cytosol, peroxisome, plastid | 88.71 | 93.75 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 90.86 | 90.86 |
| TraesCS7A01G161300.1 | Wheat | cytosol, mitochondrion, plastid | 90.32 | 88.89 |
| TraesCS2B01G008000.1 | Wheat | extracellular | 33.33 | 45.59 |
| TraesCS2B01G008100.1 | Wheat | extracellular | 32.8 | 42.07 |
| TraesCS5B01G430000.1 | Wheat | cytosol, extracellular, nucleus | 31.18 | 41.43 |
| TraesCS3B01G548900.1 | Wheat | extracellular | 25.81 | 41.03 |
| TraesCS3B01G549100.1 | Wheat | extracellular | 25.81 | 41.03 |
| TraesCS5B01G009000.1 | Wheat | plastid | 32.26 | 39.22 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 29.57 | 39.01 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 29.57 | 38.46 |
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 31.72 | 38.31 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 27.42 | 37.23 |
| TraesCS5B01G507700.1 | Wheat | extracellular | 30.65 | 36.08 |
| TraesCS7B01G431900.1 | Wheat | cytosol, nucleus, vacuole | 31.18 | 34.73 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 33.33 | 33.51 |
| TraesCS5B01G507500.1 | Wheat | plastid | 30.65 | 32.02 |
| TraesCS6B01G351700.1 | Wheat | plastid | 30.11 | 29.95 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 24.73 | 25.0 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G066300.1 | EnsemblPlantsGene:TraesCS7B01G066300 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7B:-:72240973..72241805
Molecular Weight (calculated)
20657.4 Da
IEP (calculated)
5.227
GRAVY (calculated)
-0.132
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGVDASQD LQLPARASGT DTTTLSAQGD GHDTRVVVKQ SVAAVPVRQG WQTGLFDCED DGCDAFCCSV WFPCAAFACV ADIVDQGSEG RCVHFTCYLV
101: AAYFGLWWVY TGWYRRKLRE RYGLPETPLP DCLTHLLCHW CALAQEYREL ARRGFDVDEG WEGRPRPATA PAATAVPRVQ VPMTRL
101: AAYFGLWWVY TGWYRRKLRE RYGLPETPLP DCLTHLLCHW CALAQEYREL ARRGFDVDEG WEGRPRPATA PAATAVPRVQ VPMTRL
001: MEKQWTSGLF SCMEDSETAC LTCFCPCVTF GRIADISDEG RTGCGRCGVF YGLICCVVGL PCLFSCTYRT KIRSKFGLPE SPTSDCVTHF FCECCALCQE
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
101: HRELKTRGLD PSIGWSGNMQ RTMAPPMSQQ MMG
Arabidopsis Description
PCR7Protein PLANT CADMIUM RESISTANCE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS43]
SUBAcon: [extracellular,vacuole,cytosol]
SUBAcon: [extracellular,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.