Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G017300.1 | Wheat | cytosol, extracellular, nucleus | 92.41 | 92.41 |
| TraesCS2A01G016100.1 | Wheat | extracellular | 89.66 | 89.04 |
| TraesCS2B01G008000.1 | Wheat | extracellular | 68.28 | 72.79 |
| TraesCS5B01G430000.1 | Wheat | cytosol, extracellular, nucleus | 65.52 | 67.86 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 64.14 | 65.03 |
| EES12297 | Sorghum | extracellular | 65.52 | 61.69 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 59.31 | 60.99 |
| TraesCS5B01G009000.1 | Wheat | plastid | 61.38 | 58.17 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 46.21 | 48.91 |
| TraesCS3B01G548900.1 | Wheat | extracellular | 39.31 | 48.72 |
| TraesCS3B01G549100.1 | Wheat | extracellular | 39.31 | 48.72 |
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 49.66 | 46.75 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 57.93 | 45.41 |
| TraesCS5B01G507700.1 | Wheat | extracellular | 48.97 | 44.94 |
| TraesCS7B01G431900.1 | Wheat | cytosol, nucleus, vacuole | 51.72 | 44.91 |
| TraesCS5B01G507500.1 | Wheat | plastid | 49.66 | 40.45 |
| TraesCS6B01G351700.1 | Wheat | plastid | 51.72 | 40.11 |
| KRH49878 | Soybean | endoplasmic reticulum | 39.31 | 35.85 |
| TraesCS7B01G066300.1 | Wheat | cytosol, peroxisome, plastid | 42.07 | 32.8 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 41.38 | 32.26 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 36.55 | 28.8 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G008100.1 | EnsemblPlantsGene:TraesCS2B01G008100 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF92 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:4727007..4728192
Molecular Weight (calculated)
15818.2 Da
IEP (calculated)
6.818
GRAVY (calculated)
0.168
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRNVSGAS WSTGLCDCCD DVGGCFLTWC FPCITFGRIA EIVDEGEIPC CASGALYLLL CMTTGVGMGL YSCFYRYKLR TAYGLAEKPC ADCCVHFFCG
101: ACALCQEYRE LKSRGFQMRL GWQANAERMG KGTTVAPQVD PGMTR
101: ACALCQEYRE LKSRGFQMRL GWQANAERMG KGTTVAPQVD PGMTR
001: MEAQLHAKPH AQGEWSTGFC DCFSDCRNCC ITLCCPCITF GQVAEIVDRG SKSCCAAGAL YMLIDLITSC GRMYACFYSG KMRAQYNIKG DGCTDCLKHF
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
Arabidopsis Description
PCR1Protein PLANT CADMIUM RESISTANCE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQU2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.