Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G507700.1 | Wheat | cytosol, extracellular, plastid | 97.4 | 96.77 |
| TraesCS4A01G365600.1 | Wheat | cytosol, extracellular, plastid | 94.16 | 93.55 |
| TraesCS5B01G507700.1 | Wheat | extracellular | 87.66 | 85.44 |
| TraesCS5B01G507500.1 | Wheat | plastid | 84.42 | 73.03 |
| Zm00001d012900_P001 | Maize | extracellular | 69.48 | 68.15 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 94.81 | 66.97 |
| EER90573 | Sorghum | extracellular | 66.23 | 58.96 |
| TraesCS3B01G549100.1 | Wheat | extracellular | 42.86 | 56.41 |
| TraesCS3B01G548900.1 | Wheat | extracellular | 42.86 | 56.41 |
| TraesCS1B01G418800.1 | Wheat | cytosol, extracellular, mitochondrion | 62.99 | 52.43 |
| TraesCS5B01G430000.1 | Wheat | cytosol, extracellular, nucleus | 46.75 | 51.43 |
| TraesCS2B01G008000.1 | Wheat | extracellular | 44.81 | 50.74 |
| TraesCS7B01G114500.1 | Wheat | extracellular | 44.81 | 50.37 |
| Os03t0829900-00 | Rice | extracellular | 44.16 | 50.0 |
| TraesCS2B01G008100.1 | Wheat | extracellular | 46.75 | 49.66 |
| TraesCS2B01G344100.1 | Wheat | cytosol | 45.45 | 49.65 |
| TraesCS5B01G009000.1 | Wheat | plastid | 46.1 | 46.41 |
| TraesCS2B01G007900.1 | Wheat | extracellular, vacuole | 42.86 | 46.15 |
| TraesCS7B01G431900.1 | Wheat | cytosol, nucleus, vacuole | 50.0 | 46.11 |
| TraesCS6B01G351700.1 | Wheat | plastid | 50.65 | 41.71 |
| TraesCS7B01G066300.1 | Wheat | cytosol, peroxisome, plastid | 38.31 | 31.72 |
| TraesCS7B01G066400.1 | Wheat | cytosol, peroxisome, plastid | 37.01 | 30.65 |
| TraesCS3B01G214000.1 | Wheat | cytosol | 36.36 | 30.43 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G507600.1 | EnsemblPlantsGene:TraesCS5B01G507600 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:672953338..672953802
Molecular Weight (calculated)
16685.1 Da
IEP (calculated)
5.602
GRAVY (calculated)
0.059
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMKPAAQPV TGVPVGAAPV AWSSGLFDCF DDCGLCCVTY WCPCITFGKV AEIVDRGSTS CGTSGALYAL LCSLTGCQWI YSCTYRSKMR AQYALPDGPC
101: CDCCVHFCCE PCALVQQYKE LKARGYDPEI GWHLNMERHS AGAVNPPGVQ EMGR
101: CDCCVHFCCE PCALVQQYKE LKARGYDPEI GWHLNMERHS AGAVNPPGVQ EMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.