Factsheet for Zm00001d012900_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	extracellular

extracellular: 20408568
plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G365600.1	Wheat	cytosol, extracellular, plastid	70.7	71.61
TraesCS5B01G507600.1	Wheat	cytosol, extracellular, plastid	68.15	69.48
TraesCS5D01G507700.1	Wheat	cytosol, extracellular, plastid	68.15	69.03
TraesCS5D01G507800.1	Wheat	extracellular	68.79	68.35
TraesCS4A01G365500.1	Wheat	extracellular	68.15	67.72
TraesCS5B01G507700.1	Wheat	extracellular	68.15	67.72
TraesCS4A01G365700.1	Wheat	cytosol, extracellular, mitochondrion	67.52	67.52
TraesCS5D01G507500.1	Wheat	cytosol	66.24	66.67
HORVU5Hr1G115870.1	Barley	extracellular	63.06	66.0
Zm00001d034745_P001	Maize	cytosol, extracellular, mitochondrion, plastid	74.52	65.0
Zm00001d012899_P001	Maize	cytosol, plastid, vacuole	71.97	64.57
TraesCS5D01G507600.1	Wheat	plastid	66.88	60.0
TraesCS5B01G507500.1	Wheat	plastid	66.88	58.99
Zm00001d012906_P001	Maize	cytosol, extracellular, mitochondrion	60.51	56.89
HORVU5Hr1G115750.1	Barley	plastid	66.88	56.45
HORVU5Hr1G115900.1	Barley	cytosol	66.24	53.61
Zm00001d015276_P001	Maize	cytosol, endoplasmic reticulum, nucleus	45.22	51.45
Zm00001d050899_P001	Maize	cytosol, extracellular, mitochondrion	57.96	50.28
HORVU5Hr1G115880.1	Barley	cytosol, mitochondrion, plastid	68.79	49.54
Zm00001d000070_P001	Maize	cytosol, extracellular, plastid	43.31	47.22
Zm00001d052171_P001	Maize	cytosol, mitochondrion, plastid	45.22	37.57
Zm00001d008282_P003	Maize	cytosol, extracellular, plasma membrane	35.03	29.89

Protein Annotations

EMBL:EU969601	EMBL:HM008662	EnsemblPlants:Zm00001d012900_P001	EnsemblPlants:Zm00001d012900_T001	EnsemblPlantsGene:Zm00001d012900	EntrezGene:100284761
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:PLAC_motif_containing	PANTHER:PTHR15907	PANTHER:PTHR15907:SF59
PFAM:PF04749	ProteinID:AQK61779.1	ProteinID:AQK61780.1	SEG:seg	TIGRFAMs:TIGR01571	UniParc:UPI0001DAF36E
UniProt:A0A1Q0ZBD4	UniProt:D9HP26	MapMan:35.1	:	:	:

Description

CNR10Cell number regulator 10

Coordinates

chr5:+:1768374..1769268

Molecular Weight (calculated)

16661.1 Da

IEP (calculated)

5.778

GRAVY (calculated)

0.159

Length

157 amino acids

Sequence
(BLAST)

001: MYPPKASGDP AAGAAPVTGF PVGGPAASSQ WSSGLLDCFD DCGLCCLTCW CPCITFGRVA EIVDRGATSC GTAGALYAVL AYFTGCQWIY SCTYRAKMRA
101: QLGLPETPCC DCLVHFCCEP CALCQQYKEL KARGFDPVLG WDRNATMLPP SAQGMGR

Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)

001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR

Arabidopsis Description

PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.