Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G365700.1 | Wheat | cytosol, extracellular, mitochondrion | 83.87 | 99.36 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 82.26 | 98.08 |
| HORVU5Hr1G115870.1 | Barley | extracellular | 72.58 | 90.0 |
| TraesCS5B01G507500.1 | Wheat | plastid | 83.33 | 87.08 |
| TraesCS5D01G507600.1 | Wheat | plastid | 81.18 | 86.29 |
| HORVU5Hr1G115900.1 | Barley | cytosol | 79.03 | 75.77 |
| Zm00001d012900_P001 | Maize | extracellular | 56.45 | 66.88 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 75.27 | 64.22 |
| EER90573 | Sorghum | extracellular | 56.45 | 60.69 |
| HORVU5Hr1G103960.1 | Barley | extracellular | 40.32 | 53.57 |
| Os03t0829900-00 | Rice | extracellular | 38.71 | 52.94 |
| HORVU2Hr1G002720.1 | Barley | extracellular | 38.17 | 52.21 |
| HORVU2Hr1G080550.1 | Barley | cytosol | 20.97 | 51.32 |
| HORVU2Hr1G008230.1 | Barley | cytosol, mitochondrion, plasma membrane | 41.4 | 43.26 |
| HORVU4Hr1G085480.3 | Barley | cytosol, plastid | 39.78 | 42.53 |
| HORVU2Hr1G051210.1 | Barley | extracellular | 20.97 | 41.94 |
| HORVU4Hr1G053830.3 | Barley | extracellular | 21.51 | 38.46 |
| HORVU7Hr1G042230.5 | Barley | extracellular | 21.51 | 37.74 |
| HORVU4Hr1G032480.4 | Barley | mitochondrion | 18.82 | 33.65 |
| HORVU3Hr1G037940.1 | Barley | cytosol | 30.65 | 30.98 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G115750.1 | EnsemblPlantsGene:HORVU5Hr1G115750 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | UniParc:UPI000B482190 | UniProt:A0A287SUH5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:647168575..647169509
Molecular Weight (calculated)
19552.3 Da
IEP (calculated)
5.575
GRAVY (calculated)
-0.010
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: PSTQTTATSN TQAPHLLIIS SPAVVEMKPG TEPATGVPVG GAPGAPTAWS SGLFDCFDDC GLCCLTCCCP CITFGKVAEI VDRGATSCGT SGALYVLLAS
101: LTGCHWIYSC TYRSKMRAQY ALPDAPCCDC CVHYCCEPCA LVQEYKELKA RGYDPEIGWH LNQERRNGAA AGAGGVNPPG MQEMGR
101: LTGCHWIYSC TYRSKMRAQY ALPDAPCCDC CVHYCCEPCA LVQEYKELKA RGYDPEIGWH LNQERRNGAA AGAGGVNPPG MQEMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.