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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G507800.1 Wheat extracellular 76.29 93.67
TraesCS4A01G365500.1 Wheat extracellular 75.77 93.04
TraesCS5B01G507700.1 Wheat extracellular 75.26 92.41
HORVU5Hr1G115870.1 Barley extracellular 69.07 89.33
HORVU5Hr1G115750.1 Barley plastid 75.77 79.03
Zm00001d012900_P001 Maize extracellular 53.61 66.24
HORVU5Hr1G115880.1 Barley cytosol, mitochondrion, plastid 74.23 66.06
EER90573 Sorghum extracellular 52.58 58.96
HORVU5Hr1G103960.1 Barley extracellular 37.11 51.43
Os03t0829900-00 Rice extracellular 35.57 50.74
HORVU2Hr1G002720.1 Barley extracellular 35.57 50.74
HORVU2Hr1G080550.1 Barley cytosol 19.07 48.68
HORVU2Hr1G051210.1 Barley extracellular 19.59 40.86
HORVU4Hr1G085480.3 Barley cytosol, plastid 36.6 40.8
HORVU2Hr1G008230.1 Barley cytosol, mitochondrion, plasma membrane 37.11 40.45
HORVU4Hr1G053830.3 Barley extracellular 20.1 37.5
HORVU7Hr1G042230.5 Barley extracellular 20.1 36.79
HORVU4Hr1G032480.4 Barley mitochondrion 18.04 33.65
HORVU3Hr1G037940.1 Barley cytosol 27.32 28.8
Protein Annotations
EnsemblPlants:HORVU5Hr1G115900.1EnsemblPlantsGene:HORVU5Hr1G115900InterPro:PLAC_motif_containingPANTHER:PTHR15907PANTHER:PTHR15907:SF59PFAM:PF04749
SEG:segTIGRFAMs:TIGR01571UniParc:UPI000B48653AUniProt:A0A287SUJ5MapMan:35.1:
Description
No Description!
Coordinates
chrchr5H:-:647374845..647375900
Molecular Weight (calculated)
21172.3 Da
IEP (calculated)
6.068
GRAVY (calculated)
-0.042
Length
194 amino acids
Sequence
(BLAST)
001: SIISQNIHDL RIYICIPWRQ FPAQNNKELI TYFYSSPAVV EMKPAAQPLS GAPAPSAWSS GLFDCFDDCG LCCLTCWCPC ITFGKVAEIV DRGSTSCGTS
101: GALYALLASL TGCHWIYSCT YRSKMRAQYA LPDEPCCDCC VHFCCEPCGL IQQYKELKAR GYDPDIGWHL NVERGNGGAG AGGVNPPGMQ EMGR
Best Arabidopsis Sequence Match ( AT1G14870.1 )
(BLAST)
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGWAGNV ERQQNQGGVA MGAPVFQGGM TR
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.