Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G507600.1 | Wheat | cytosol, extracellular, plastid | 96.77 | 97.4 |
| TraesCS4A01G365600.1 | Wheat | cytosol, extracellular, plastid | 95.48 | 95.48 |
| TraesCS5D01G507800.1 | Wheat | extracellular | 89.03 | 87.34 |
| TraesCS5D01G507500.1 | Wheat | cytosol | 85.16 | 84.62 |
| TraesCS5D01G507600.1 | Wheat | plastid | 83.23 | 73.71 |
| Zm00001d012900_P001 | Maize | extracellular | 69.03 | 68.15 |
| HORVU5Hr1G115880.1 | Barley | cytosol, mitochondrion, plastid | 95.48 | 67.89 |
| EER90573 | Sorghum | extracellular | 65.81 | 58.96 |
| TraesCS3D01G494900.1 | Wheat | extracellular | 41.94 | 55.08 |
| TraesCS5D01G436100.1 | Wheat | extracellular | 47.74 | 52.86 |
| TraesCS1D01G398700.1 | Wheat | cytosol, extracellular, mitochondrion | 62.58 | 52.43 |
| TraesCS7D01G210100.1 | Wheat | endoplasmic reticulum, extracellular, nucleus | 45.81 | 51.82 |
| Os03t0829900-00 | Rice | extracellular | 43.87 | 50.0 |
| TraesCS7D01G522100.1 | Wheat | endoplasmic reticulum, extracellular | 44.52 | 50.0 |
| TraesCS2D01G017300.1 | Wheat | cytosol, extracellular, nucleus | 46.45 | 49.66 |
| TraesCS2D01G325100.1 | Wheat | endoplasmic reticulum, extracellular | 30.32 | 48.96 |
| TraesCS2D01G052000.1 | Wheat | cytosol | 47.74 | 48.68 |
| TraesCS7D01G210000.1 | Wheat | extracellular | 42.58 | 47.48 |
| TraesCS7D01G505600.1 | Wheat | cytosol, nucleus, vacuole | 50.32 | 46.71 |
| TraesCS2D01G017200.1 | Wheat | extracellular | 25.81 | 46.51 |
| TraesCS6D01G300700.1 | Wheat | plastid | 50.97 | 42.25 |
| TraesCS2D01G017100.1 | Wheat | cytosol, extracellular, plastid | 30.97 | 35.56 |
| TraesCS7D01G162600.1 | Wheat | cytosol, peroxisome, plastid | 38.71 | 34.09 |
| TraesCS3D01G188300.1 | Wheat | extracellular | 36.13 | 30.43 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G507700.1 | EnsemblPlantsGene:TraesCS5D01G507700 | InterPro:PLAC_motif_containing | PANTHER:PTHR15907 | PANTHER:PTHR15907:SF59 | PFAM:PF04749 |
| SEG:seg | TIGRFAMs:TIGR01571 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:533000232..533000699
Molecular Weight (calculated)
16731.2 Da
IEP (calculated)
5.689
GRAVY (calculated)
0.063
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMKPAAQPV TGVPVGAAPA AWSSGLFDCF DDCGLCCVTY WCPCITFGKV AEIVDRGSTS CGTSGALYAL LCSLTGCQWI YSCTYRSKMR AQYALPDAPC
101: CDCCVHFCCE PCALVQQYKE LKARGYDPEI GWHLNMERRA GAGAVNPPGV QEMGR
101: CDCCVHFCCE PCALVQQYKE LKARGYDPEI GWHLNMERRA GAGAVNPPGV QEMGR
001: MEAQHLHAKP HAEGEWSTGF CDCFSDCKNC CITFWCPCIT FGQVAEIVDR GSTSCGTAGA LYALIAVVTG CACIYSCFYR GKMRAQYNIK GDDCTDCLKH
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
101: FCCELCSLTQ QYRELKHRGY DMSLGNLFLR YTVFFLFHFV NN
Arabidopsis Description
PCR2PCR2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDU8]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.