Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 4
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Protein Annotations
| EntrezGene:100777969 | Gene3D:2.30.30.30 | MapMan:35.1 | EMBL:ACUP02012642 | EnsemblPlantsGene:GLYMA_20G115100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006368 |
| GO:GO:0006397 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0032044 | UniProt:I1NFI4 | InterPro:IPR014722 | EnsemblPlants:KRG90810 | ProteinID:KRG90810 |
| ProteinID:KRG90810.1 | PANTHER:PTHR11125 | PANTHER:PTHR11125:SF8 | InterPro:Rib_L2_dom2 | UniParc:UPI000295732E | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:35683676..35690153
Molecular Weight (calculated)
92855.2 Da
IEP (calculated)
8.311
GRAVY (calculated)
-1.218
Length
896 amino acids
Sequence
(BLAST)
(BLAST)
001: MILSGCLRVQ LRVNKALLST FIEGLSFYMM EMRKKMDLTC KTNMCEKVKL AVGDCSGKDS EPGPLVFEDQ PSSPRSPLSP KKPWQARENN REFNRGDNNN
101: MFTIGQTLRI RIGPLKGYIC RVIALRRADV TVKLDSQQKV LTVKCEHLSE VQGKSTAISS SGDPDSSSSK PFDMLGTEGS SGGWLNGVGT STGAGGWNAG
201: GASSTGGSGW NAGGASATGG GGWNVGGASS TGGGGWNAGG ASSTGGGGWN AGGPSSKRDA GSNHSAPSLL NTESTSNPFS SKGAEDSAWE TKSNSNKTSS
301: WGAAVDKTGI ASNADQSGGW GSGGGSWGQA EHKTGSVGDG NQNSNWNTTK ASEGESSGWN SIQKSNETSS AGWGGGNGFK SGSDEGNLNS TWSGWKSGSS
401: GVKQAGNPAG TSDIDANQDA GWKNKPNKDG SESSGWETKN NWNAPVSSSN DKVEKGNDQG GWNAGKASGG SAVDFSQASG WKGGLSEHTQ EGSNWGDKKF
501: GSCDACGDSS GNQGSNGWGQ KSNWNSGSRS GNETQNSHWS SGRNEPGNQD SNLDKKSNWN SGNSGNLASD PKSSNWNSGY ENSNWGTNVN NKSSWGTGNE
601: NKNSSWSSGH SDPGNQDANQ GKKSNGNSGN SGNQPSDPNS NWNSNKSSWS AGNENKKSNW SSGDPGNKDS NWGNKNNCIS GSGDANQNTT WRSNSSWNTA
701: NASSDDGNEG SNENSDGVGG GNWRGGYRGR GGSDRGGFRG RGFRGKGERG GFSGRGELGG FGGRGEQGGF GGRGRSDGEG FGGRWGSEGG RGGRGRGRND
801: QSGGWNNRRD SGEDGPSDWK KGADNGGWKN SNGSQAWNQD TGDKDRQSWS QGNADKEHPS WNQGSGRNQS WSSASGANDN GSQAWNQGNA DKEHPS
101: MFTIGQTLRI RIGPLKGYIC RVIALRRADV TVKLDSQQKV LTVKCEHLSE VQGKSTAISS SGDPDSSSSK PFDMLGTEGS SGGWLNGVGT STGAGGWNAG
201: GASSTGGSGW NAGGASATGG GGWNVGGASS TGGGGWNAGG ASSTGGGGWN AGGPSSKRDA GSNHSAPSLL NTESTSNPFS SKGAEDSAWE TKSNSNKTSS
301: WGAAVDKTGI ASNADQSGGW GSGGGSWGQA EHKTGSVGDG NQNSNWNTTK ASEGESSGWN SIQKSNETSS AGWGGGNGFK SGSDEGNLNS TWSGWKSGSS
401: GVKQAGNPAG TSDIDANQDA GWKNKPNKDG SESSGWETKN NWNAPVSSSN DKVEKGNDQG GWNAGKASGG SAVDFSQASG WKGGLSEHTQ EGSNWGDKKF
501: GSCDACGDSS GNQGSNGWGQ KSNWNSGSRS GNETQNSHWS SGRNEPGNQD SNLDKKSNWN SGNSGNLASD PKSSNWNSGY ENSNWGTNVN NKSSWGTGNE
601: NKNSSWSSGH SDPGNQDANQ GKKSNGNSGN SGNQPSDPNS NWNSNKSSWS AGNENKKSNW SSGDPGNKDS NWGNKNNCIS GSGDANQNTT WRSNSSWNTA
701: NASSDDGNEG SNENSDGVGG GNWRGGYRGR GGSDRGGFRG RGFRGKGERG GFSGRGELGG FGGRGEQGGF GGRGRSDGEG FGGRWGSEGG RGGRGRGRND
801: QSGGWNNRRD SGEDGPSDWK KGADNGGWKN SNGSQAWNQD TGDKDRQSWS QGNADKEHPS WNQGSGRNQS WSSASGANDN GSQAWNQGNA DKEHPS
0001: MDRKGKGKQV AGSDSYSGGQ KRKNSVEFRD EGLRIKKRKN PEVLQFFEES AEVGYYGGSS DEDDDGLGFL NDMEDEPEVE ESSKAGKGEK GKSSFVFPKE
0101: EDLNEEEFDR IMEERYKPGS GFLRYADDDI KDAIEMDALA PTSKDPPIWK VKCAIGRERR SVFCLMHKFV ELRKIGTKLE IISVFSVDHV KGFIFIEADK
0201: EHDVLEACKS LVGIYATRMV LLPKAETPNL LTVQKKTKKV SEGTWARVKN GKYKGDLAQI VAVSDTRNKA LIKLIPRIDI QALTQKYGGG VTVQKGQTPA
0301: PRLISSSELE EFRPLIQVRR DRDTGITFEH LDSLMLKDGY LYKKVSLDSI SSWGVIPTKD ELLKFTPVDR KETGDVEWIS EIYGEERKKK ILPTCREGGK
0401: GEGSGGGKGE GSGGGKGEGS RGGKGEGSSD FKSESSYELY NLVCFSRKDF GLIVGVDDKG DGYKVLKEGI DGPVVVTVGK KEMQNGPFDS KFTALDLNKK
0501: QISVNDVVKI SKGPSEGKQG VVRQVYRGII FLYDESEEEN GGYFCCKSQS CEKVKLFTEE SNEKTGGFDG TAFEDFVSSP KSPLSPEKEW QPRERYNSSN
0601: QGDIGSTYSI GQKLRIRVGP LKGYLCRVIA LRYSDVTVKL DSQHKIFTVK SEHLAEVRDR NTVLSTSGDA GTGSFQPFGM LGTESSTGDW AIGAGTSSEG
0701: GNWNIGGPST DSHESLNIER NMVQLCREKN PWGGSKPTSD VSPTVADDNT SAWANAAAEN KPASASDQPG GWNPWGKTPA SEAGTVSGWG DTSASNVEAS
0801: SWEKQGASTS NVADLGSWGT HGGSSGGNKQ DEDSVWGKLC EASESSQKKE ESSWGKKGGS DGESSWGNKD GNSSASKKDG VSWGQQDKGS DESKGGSAWS
0901: NQCGDFGSGK KKDGSSGWNK SAEDSNANSK GVPDWGQPND GSSWGKKGDG AASWGKKDDG GSWGKKDDGN KDDGGSSWGK KDDGQKDDGG SSWEKKFDGG
1001: SSWGKKDDGG SSWGKKDDGG SLWGKKDDGG SSWGKEDDGG SLWGKKDDGE SSWGKKDDGE SSWGKKDDGG SSWGKKDEGG YSEQTFDRGG RGFGGRRGGG
1101: RRGGRDQFGR GSSFGNSEDP APWSKPSGGS SWGKQDGDGG GSSWGKENDA GGGSSWGKQD NGVGSSWGKQ NDGSGGGSSW GKQNDAGGGS SWGKQDSGGD
1201: GSSWGKQDGG GDSGSAWGKQ NNTSGGSSWG KQSDAGGGSS WGKQDGGGGG SSWGKQDGGG GSGSAWGKQN ETSNGSSWGK QNDSGGGSSW GKQDGGGGGS
1301: SWGKQNDGGG GSSWGKQGDG GSKPWNEHSG GGRGFGERRG GGGFRGGRNQ SGRGGRSFDG GRSSSWKTDN QENTWKSDQS GGSDWKKGWG EDSNNSKPSG
1401: SSAGGCAGNW PSWDTNSKKE TNDKPGDDSK SAWGTSNDQV NTDNNNDSWN KKPNNDVGTS GEADNAWGGK TNAVAPSPSG SAAWGTGDKK TGW
0101: EDLNEEEFDR IMEERYKPGS GFLRYADDDI KDAIEMDALA PTSKDPPIWK VKCAIGRERR SVFCLMHKFV ELRKIGTKLE IISVFSVDHV KGFIFIEADK
0201: EHDVLEACKS LVGIYATRMV LLPKAETPNL LTVQKKTKKV SEGTWARVKN GKYKGDLAQI VAVSDTRNKA LIKLIPRIDI QALTQKYGGG VTVQKGQTPA
0301: PRLISSSELE EFRPLIQVRR DRDTGITFEH LDSLMLKDGY LYKKVSLDSI SSWGVIPTKD ELLKFTPVDR KETGDVEWIS EIYGEERKKK ILPTCREGGK
0401: GEGSGGGKGE GSGGGKGEGS RGGKGEGSSD FKSESSYELY NLVCFSRKDF GLIVGVDDKG DGYKVLKEGI DGPVVVTVGK KEMQNGPFDS KFTALDLNKK
0501: QISVNDVVKI SKGPSEGKQG VVRQVYRGII FLYDESEEEN GGYFCCKSQS CEKVKLFTEE SNEKTGGFDG TAFEDFVSSP KSPLSPEKEW QPRERYNSSN
0601: QGDIGSTYSI GQKLRIRVGP LKGYLCRVIA LRYSDVTVKL DSQHKIFTVK SEHLAEVRDR NTVLSTSGDA GTGSFQPFGM LGTESSTGDW AIGAGTSSEG
0701: GNWNIGGPST DSHESLNIER NMVQLCREKN PWGGSKPTSD VSPTVADDNT SAWANAAAEN KPASASDQPG GWNPWGKTPA SEAGTVSGWG DTSASNVEAS
0801: SWEKQGASTS NVADLGSWGT HGGSSGGNKQ DEDSVWGKLC EASESSQKKE ESSWGKKGGS DGESSWGNKD GNSSASKKDG VSWGQQDKGS DESKGGSAWS
0901: NQCGDFGSGK KKDGSSGWNK SAEDSNANSK GVPDWGQPND GSSWGKKGDG AASWGKKDDG GSWGKKDDGN KDDGGSSWGK KDDGQKDDGG SSWEKKFDGG
1001: SSWGKKDDGG SSWGKKDDGG SLWGKKDDGG SSWGKEDDGG SLWGKKDDGE SSWGKKDDGE SSWGKKDDGG SSWGKKDEGG YSEQTFDRGG RGFGGRRGGG
1101: RRGGRDQFGR GSSFGNSEDP APWSKPSGGS SWGKQDGDGG GSSWGKENDA GGGSSWGKQD NGVGSSWGKQ NDGSGGGSSW GKQNDAGGGS SWGKQDSGGD
1201: GSSWGKQDGG GDSGSAWGKQ NNTSGGSSWG KQSDAGGGSS WGKQDGGGGG SSWGKQDGGG GSGSAWGKQN ETSNGSSWGK QNDSGGGSSW GKQDGGGGGS
1301: SWGKQNDGGG GSSWGKQGDG GSKPWNEHSG GGRGFGERRG GGGFRGGRNQ SGRGGRSFDG GRSSSWKTDN QENTWKSDQS GGSDWKKGWG EDSNNSKPSG
1401: SSAGGCAGNW PSWDTNSKKE TNDKPGDDSK SAWGTSNDQV NTDNNNDSWN KKPNNDVGTS GEADNAWGGK TNAVAPSPSG SAAWGTGDKK TGW
Arabidopsis Description
RDM3Protein RNA-directed DNA methylation 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JW79]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.