Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25985 | Soybean | cytosol | 4.53 | 11.76 |
| KRH62883 | Soybean | endoplasmic reticulum | 12.45 | 11.26 |
| KRH29998 | Soybean | nucleus | 12.08 | 10.92 |
| KRH06320 | Soybean | nucleus | 14.34 | 10.47 |
| KRH47743 | Soybean | nucleus | 14.34 | 10.47 |
| Solyc11g065960.1.1 | Tomato | plasma membrane, plastid | 6.42 | 10.12 |
Protein Annotations
| Gene3D:3.40.50.10480 | MapMan:35.2 | UniProt:A0A0R0EJ16 | EMBL:ACUP02011801 | InterPro:Brix | EnsemblPlantsGene:GLYMA_19G066600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0030515 | GO:GO:0032040 | GO:GO:0034457 | GO:GO:0042134 |
| InterPro:IPR007109 | EnsemblPlants:KRG94166 | ProteinID:KRG94166 | ProteinID:KRG94166.1 | PFscan:PS50833 | PANTHER:PTHR22734 |
| PANTHER:PTHR22734:SF2 | SUPFAM:SSF52954 | UniParc:UPI0006EDC092 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:+:18168108..18174666
Molecular Weight (calculated)
29570.0 Da
IEP (calculated)
9.133
GRAVY (calculated)
-0.533
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MYDTAPHSSP PNPPRHAPSR VRLPHRSNNS PQYWTREGAI HSFQGMTLDA SALSLAAASF SLRFTHSFIH ILCKESPSSV ERIGETQALL RVQAQIHAGR
101: AQILHSPSSI AHLHGPATPD KFEIPIRSES MKNDQYSSPL LKINGSNRER CSMDEERSVR IMDSGVRKPA GSGMKIIDSG CSHGDSFHYK ATIEFGILSS
201: RTHIDDEYAY AVEKDPKILL TWDPSAPLQQ FVKELSFVFP NVQRMNRGGQ NSAWLIQRGV KIENN
101: AQILHSPSSI AHLHGPATPD KFEIPIRSES MKNDQYSSPL LKINGSNRER CSMDEERSVR IMDSGVRKPA GSGMKIIDSG CSHGDSFHYK ATIEFGILSS
201: RTHIDDEYAY AVEKDPKILL TWDPSAPLQQ FVKELSFVFP NVQRMNRGGQ NSAWLIQRGV KIENN
001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE
Arabidopsis Description
IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.