Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001044 | Potato | mitochondrion, nucleus | 35.29 | 21.56 |
| GSMUA_Achr9P00390_001 | Banana | mitochondrion, nucleus | 36.27 | 18.23 |
| KRH62883 | Soybean | endoplasmic reticulum | 50.0 | 17.41 |
| KRH29998 | Soybean | nucleus | 50.0 | 17.41 |
| Solyc11g065980.1.1 | Tomato | cytosol | 42.16 | 15.87 |
| VIT_13s0019g00850.t01 | Wine grape | mitochondrion, nucleus | 44.12 | 15.36 |
| Bra027789.1-P | Field mustard | mitochondrion, nucleus | 43.14 | 14.97 |
| CDY08321 | Canola | mitochondrion, nucleus | 43.14 | 14.97 |
| CDY71038 | Canola | mitochondrion, nucleus | 43.14 | 14.77 |
| Solyc01g007250.2.1 | Tomato | nucleus | 42.16 | 14.68 |
| AT1G63780.1 | Thale cress | mitochondrion, nucleus | 42.16 | 14.63 |
| Os08t0155000-01 | Rice | nucleus | 41.18 | 14.33 |
| TraesCS7A01G301400.1 | Wheat | mitochondrion, nucleus | 39.22 | 13.65 |
| TraesCS7B01G201700.1 | Wheat | mitochondrion, nucleus | 39.22 | 13.65 |
| HORVU7Hr1G071450.1 | Barley | nucleus | 39.22 | 13.65 |
| TraesCS7D01G296800.1 | Wheat | nucleus | 39.22 | 13.65 |
| PGSC0003DMT400042226 | Potato | mitochondrion, nucleus | 42.16 | 13.27 |
| Zm00001d014626_P002 | Maize | plastid | 36.27 | 12.63 |
| EER90306 | Sorghum | mitochondrion, nucleus | 36.27 | 12.63 |
| EES14567 | Sorghum | mitochondrion | 34.31 | 11.95 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane, plastid | 15.69 | 10.67 |
| KRH47743 | Soybean | nucleus | 25.49 | 7.16 |
| KRH06320 | Soybean | nucleus | 25.49 | 7.16 |
| KRG94166 | Soybean | plastid | 11.76 | 4.53 |
Protein Annotations
| EMBL:ACUP02007427 | EnsemblPlants:KRH25985 | EnsemblPlantsGene:GLYMA_12G143800 | Gene3D:3.40.50.10480 | InterPro:Brix | InterPro:IPR007109 |
| PANTHER:PTHR22734 | PANTHER:PTHR22734:SF2 | PFscan:PS50833 | ProteinID:KRH25985 | ProteinID:KRH25985.1 | SUPFAM:SSF52954 |
| UniParc:UPI0006EDD1BA | UniProt:A0A0R0H542 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:18891080..18895221
Molecular Weight (calculated)
11686.1 Da
IEP (calculated)
4.721
GRAVY (calculated)
-0.086
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPSNIKQP WNSEYSVPRT HIDDEYAYAA EKDPKILLTT SRDPSAPLQQ FVKELSFVFP NVQRVNPDGQ MCQVKIIFFK GPNCIFCNSV CEFGLVFLLL
101: DI
101: DI
001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE
Arabidopsis Description
IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.