Factsheet for GSMUA_AchrUn_randomP09580_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P00390_001	Banana	mitochondrion, nucleus	40.67	30.05
Os08t0155000-01	Rice	nucleus	41.33	21.16
Solyc11g065980.1.1	Tomato	cytosol	38.0	21.03
TraesCS7D01G296800.1	Wheat	nucleus	40.67	20.82
TraesCS7B01G201700.1	Wheat	mitochondrion, nucleus	40.67	20.82
TraesCS7A01G301400.1	Wheat	mitochondrion, nucleus	40.67	20.82
HORVU7Hr1G071450.1	Barley	nucleus	40.67	20.82
KRH29998	Soybean	nucleus	40.0	20.48
VIT_13s0019g00850.t01	Wine grape	mitochondrion, nucleus	39.33	20.14
KRH62883	Soybean	endoplasmic reticulum	39.33	20.14
Zm00001d014626_P002	Maize	plastid	38.67	19.8
EER90306	Sorghum	mitochondrion, nucleus	38.67	19.8
Solyc01g007250.2.1	Tomato	nucleus	38.0	19.45
EES14567	Sorghum	mitochondrion	37.33	19.11
AT1G63780.1	Thale cress	mitochondrion, nucleus	36.67	18.71
PGSC0003DMT400042226	Potato	mitochondrion, nucleus	38.0	17.59
CDY08321	Canola	mitochondrion, nucleus	33.33	17.01
Bra027789.1-P	Field mustard	mitochondrion, nucleus	33.33	17.01
CDY71038	Canola	mitochondrion, nucleus	33.33	16.78
KRH25985	Soybean	cytosol	10.67	15.69
PGSC0003DMT400001044	Potato	mitochondrion, nucleus	14.0	12.57
GSMUA_Achr8P29700_001	Banana	nucleus	21.33	10.09
GSMUA_Achr8P29710_001	Banana	plastid	21.33	9.28
GSMUA_Achr8P13740_001	Banana	nucleus	20.67	8.81

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP09580_001	EnsemblPlants:GSMUA_AchrUn_randomT09580_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG09580_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR22734	PANTHER:PTHR22734:SF2	SUPFAM:SSF52954	TMHMM:TMhelix	UniParc:UPI000296CCF8	UniProt:M0U7R8
MapMan:35.2	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09580_001]

Coordinates

chrchrUn_random:+:44952475..44956396

Molecular Weight (calculated)

16596.7 Da

IEP (calculated)

8.643

GRAVY (calculated)

0.557

Length

150 amino acids

Sequence
(BLAST)

001: MCCPACMSSS AFKSFLYVHV LPPKPLTQFV KELKFVITNS TRTNRGGEVY GLIVCHLSFA PTAYFGLFNV VTRHDVMDKN VVGTMSEAYP HLILDNFTSK
101: VCLIFLFLCS LIYLLKGVCC LVGGTFMSYL LFFIKKLGTM CGNGKTSESG

Best Arabidopsis Sequence Match ( AT1G63780.1 )
(BLAST)

001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE

Arabidopsis Description

IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.