CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90306	Sorghum	mitochondrion, nucleus	87.37	87.37
Zm00001d014626_P002	Maize	plastid	86.69	86.69
Os08t0155000-01	Rice	nucleus	78.84	78.84
HORVU7Hr1G071450.1	Barley	nucleus	78.16	78.16
TraesCS7D01G296800.1	Wheat	nucleus	77.82	77.82
TraesCS7B01G201700.1	Wheat	mitochondrion, nucleus	77.47	77.47
TraesCS7A01G301400.1	Wheat	mitochondrion, nucleus	77.47	77.47
VIT_13s0019g00850.t01	Wine grape	mitochondrion, nucleus	72.01	72.01
Solyc01g007250.2.1	Tomato	nucleus	70.99	70.99
GSMUA_Achr9P00390_001	Banana	mitochondrion, nucleus	48.81	70.44
KRH29998	Soybean	nucleus	69.97	69.97
KRH62883	Soybean	endoplasmic reticulum	68.26	68.26
PGSC0003DMT400001044	Potato	mitochondrion, nucleus	37.88	66.47
AT1G63780.1	Thale cress	mitochondrion, nucleus	65.19	64.97
CDY08321	Canola	mitochondrion, nucleus	64.51	64.29
Bra027789.1-P	Field mustard	mitochondrion, nucleus	64.51	64.29
PGSC0003DMT400042226	Potato	mitochondrion, nucleus	70.99	64.2
Solyc11g065980.1.1	Tomato	cytosol	59.04	63.84
CDY71038	Canola	mitochondrion, nucleus	64.51	63.42
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, plastid	19.11	37.33
KRH25985	Soybean	cytosol	11.95	34.31
EER89152	Sorghum	nucleus	28.67	23.2

Protein Annotations

MapMan:17.1.3.2.1.1.2	Gene3D:3.40.50.10480	EntrezGene:8067854	InterPro:Brix	UniProt:C5YGY8	EnsemblPlants:EES14567
ProteinID:EES14567	ProteinID:EES14567.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0006139
GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0030515	GO:GO:0032040
GO:GO:0034457	GO:GO:0042134	InterPro:IPR007109	PFAM:PF04427	PFscan:PS50833	PANTHER:PTHR22734
PANTHER:PTHR22734:SF2	SMART:SM00879	EnsemblPlantsGene:SORBI_3007G043900	SUPFAM:SSF52954	unigene:Sbi.21696	UniParc:UPI0001A87BDE
RefSeq:XP_002445072.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4436672..4442353

Molecular Weight (calculated)

33714.8 Da

IEP (calculated)

10.614

GRAVY (calculated)

-0.643

Length

293 amino acids

Sequence
(BLAST)

001: MIRRRMRDRR QYLHSKSGEA SQRALFQKKR RIRAALEEGK PIPTELRNEV RELRRQIDLE DQETRVPKSM ADNEYATASV REPKILFTTS RNPSAPLTQF
101: VKELKVVFPM SQRMNRGGQV ISEIVESCRS HNITDLILVH EHRGQPDGLI VSHLPNGPTA YFGLLNVVTR HDIRGRKAMG KMSEAYPHLV LDNFSTQVGE
201: RTATILKHLF LMPKPDSKRI ITFANRDEYI SFRHHVYEKS GGPGSMELKE VGPRFELRLY QIKLGAVEQN EAQSEFVLRP YINTAKKQKT VGA

Best Arabidopsis Sequence Match ( AT1G63780.1 )
(BLAST)

001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE

Arabidopsis Description

IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.