Factsheet for TraesCS7A01G301400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G296800.1	Wheat	nucleus	99.66	99.66
TraesCS7B01G201700.1	Wheat	mitochondrion, nucleus	99.32	99.32
HORVU7Hr1G071450.1	Barley	nucleus	99.32	99.32
Os08t0155000-01	Rice	nucleus	93.17	93.17
EER90306	Sorghum	mitochondrion, nucleus	85.32	85.32
Zm00001d014626_P002	Maize	plastid	84.98	84.98
GSMUA_Achr9P00390_001	Banana	mitochondrion, nucleus	57.34	82.76
VIT_13s0019g00850.t01	Wine grape	mitochondrion, nucleus	80.2	80.2
KRH29998	Soybean	nucleus	79.18	79.18
Solyc01g007250.2.1	Tomato	nucleus	78.84	78.84
KRH62883	Soybean	endoplasmic reticulum	77.47	77.47
EES14567	Sorghum	mitochondrion	77.47	77.47
PGSC0003DMT400001044	Potato	mitochondrion, nucleus	43.34	76.05
CDY08321	Canola	mitochondrion, nucleus	70.65	70.41
Bra027789.1-P	Field mustard	mitochondrion, nucleus	70.65	70.41
PGSC0003DMT400042226	Potato	mitochondrion, nucleus	77.82	70.37
CDY71038	Canola	mitochondrion, nucleus	70.65	69.46
AT1G63780.1	Thale cress	mitochondrion, nucleus	69.62	69.39
Solyc11g065980.1.1	Tomato	cytosol	63.14	68.27
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, plastid	20.82	40.67
KRH25985	Soybean	cytosol	13.65	39.22
TraesCS4A01G375600.1	Wheat	nucleus	32.76	26.97
TraesCS7A01G077100.1	Wheat	nucleus	32.76	26.97

Protein Annotations

EnsemblPlants:TraesCS7A01G301400.1	EnsemblPlantsGene:TraesCS7A01G301400	Gene3D:3.40.50.10480	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0016363	InterPro:Brix	InterPro:IPR007109	ncoils:Coil	PANTHER:PTHR22734
PANTHER:PTHR22734:SF2	PFAM:PF04427	PFscan:PS50833	SEG:seg	SMART:SM00879	SUPFAM:SSF52954
MapMan:17.1.3.2.1.1.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:419776404..419780724

Molecular Weight (calculated)

34088.1 Da

IEP (calculated)

10.058

GRAVY (calculated)

-0.747

Length

293 amino acids

Sequence
(BLAST)

001: MLRRNTRLRR EYLYRKSLEG KERQHYEKKR RVREALEEGK PIPTELRNEE LALRREIDLD DQDRAVPRSI IDDEYAGATL REPKILLTTS RNPSAPLTQF
101: VKELKVVFPN SQRMNRGGQV ISEIVESCRS HEITDLILVH EHRGQPDGLI VCHLPLGPTA YFGLLNVVTR HDIKDRKAMG KMSEAYPHLI LDNFTTKTGE
201: RTANIMKHLF PVPKPESKRL ITFANRDDYI SFRHHIYEKH GGPKSIDLKE VGPRFELRLY QIKRGTVDQS EAQNEFVLRP YMNTAKKQNS LGV

Best Arabidopsis Sequence Match ( AT1G63780.1 )
(BLAST)

001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE

Arabidopsis Description

IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.