Factsheet for HORVU7Hr1G071450.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G296800.1	Wheat	nucleus	99.66	99.66
TraesCS7B01G201700.1	Wheat	mitochondrion, nucleus	99.32	99.32
TraesCS7A01G301400.1	Wheat	mitochondrion, nucleus	99.32	99.32
Os08t0155000-01	Rice	nucleus	93.86	93.86
EER90306	Sorghum	mitochondrion, nucleus	86.01	86.01
Zm00001d014626_P002	Maize	plastid	85.67	85.67
GSMUA_Achr9P00390_001	Banana	mitochondrion, nucleus	57.34	82.76
VIT_13s0019g00850.t01	Wine grape	mitochondrion, nucleus	80.89	80.89
KRH29998	Soybean	nucleus	79.86	79.86
Solyc01g007250.2.1	Tomato	nucleus	79.18	79.18
KRH62883	Soybean	endoplasmic reticulum	78.16	78.16
EES14567	Sorghum	mitochondrion	78.16	78.16
PGSC0003DMT400001044	Potato	mitochondrion, nucleus	43.34	76.05
CDY08321	Canola	mitochondrion, nucleus	71.33	71.09
Bra027789.1-P	Field mustard	mitochondrion, nucleus	71.33	71.09
PGSC0003DMT400042226	Potato	mitochondrion, nucleus	78.16	70.68
CDY71038	Canola	mitochondrion, nucleus	71.33	70.13
AT1G63780.1	Thale cress	mitochondrion, nucleus	70.31	70.07
Solyc11g065980.1.1	Tomato	cytosol	63.48	68.63
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, plastid	20.82	40.67
KRH25985	Soybean	cytosol	13.65	39.22
HORVU7Hr1G018900.26	Barley	nucleus	32.42	26.03

Protein Annotations

MapMan:17.1.3.2.1.1.2	Gene3D:3.40.50.10480	EMBL:AK354100	EMBL:AK358978	EMBL:AK359626	InterPro:Brix
ncoils:Coil	UniProt:F2CR48	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0016363	EnsemblPlantsGene:HORVU7Hr1G071450	EnsemblPlants:HORVU7Hr1G071450.1	InterPro:IPR007109	PFAM:PF04427	PFscan:PS50833
PANTHER:PTHR22734	PANTHER:PTHR22734:SF2	SMART:SM00879	SUPFAM:SSF52954	UniParc:UPI0002004559	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CR48]

Coordinates

chrchr7H:-:393639712..393644962

Molecular Weight (calculated)

34088.2 Da

IEP (calculated)

10.122

GRAVY (calculated)

-0.748

Length

293 amino acids

Sequence
(BLAST)

001: MLRRNTRLRR EYLYRKSLEG KERQHYEKKR RVREALEEGK PIPTELRNEE LALRREIDLD DQDRAVPRSI IDDEYAGATL REPKILLTTS RNPSAPLTQF
101: VKELKVVFPN SQRMNRGGQV ISEIVESCRS HEITDLILVH EHRGQPDGLI VCHLPLGPTA YFGLLNVVTR HDIKDRKAMG KMSEAYPHLI LDNFTTKTGE
201: RTANIMKHLF PVPKPDSKRL ITFANRDDYI SFRHHIYEKH GGPKSIDLKE VGPRFELRLY QIKRGTVDQS EAQNEFVLRP YMNTAKKQKS LGV

Best Arabidopsis Sequence Match ( AT1G63780.1 )
(BLAST)

001: MQRRLVRLKK EYIYRKSLEG DERKVYEQKR LIREALQEGK PIPTELRNVE AKLRQEIDLE DQNTAVPRSH IDDEYANATE ADPKILLTTS RNPSAPLIRF
101: TKELKFVFPN SQRINRGSQV ISEIIETARS HDFTDVILVH EHRGVPDGLI ISHLPFGPTA YFGLLNVVTR HDISDKKSIG KMPEQYPHLI FNNFTTQMGQ
201: RVGNILKHIF PAPKLDAKRI VTFSNQSDYI SFRNHVYDKG EGGPKSIELK EIGPRFELRL YQVKLGTVEQ NEAEIEWVIR PYMNTSKKRK FIGE

Arabidopsis Description

IMP4IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.