Factsheet for GSMUA_Achr8P13740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P29700_001	Banana	nucleus	72.16	80.13
GSMUA_Achr8P29710_001	Banana	plastid	74.43	75.94
Solyc11g066280.1.1	Tomato	nucleus	61.08	64.18
VIT_14s0036g01520.t01	Wine grape	nucleus	62.22	63.29
VIT_07s0031g03160.t01	Wine grape	nucleus	62.22	63.29
TraesCS7A01G077100.1	Wheat	nucleus	63.07	62.36
TraesCS4A01G375600.1	Wheat	nucleus	63.07	62.36
Zm00001d011121_P001	Maize	nucleus, plasma membrane	63.64	62.22
TraesCS7D01G072700.1	Wheat	nucleus	62.78	62.08
EER89152	Sorghum	nucleus	63.64	61.88
KRH47743	Soybean	nucleus	63.64	61.71
KRH06320	Soybean	nucleus	63.64	61.71
PGSC0003DMT400001077	Potato	cytosol	61.93	61.41
CDY07134	Canola	nucleus	60.23	60.74
AT4G01560.1	Thale cress	nucleus	59.09	60.64
CDY58227	Canola	nucleus	59.94	60.46
Bra036325.1-P	Field mustard	nucleus	59.94	60.29
HORVU7Hr1G018900.26	Barley	nucleus	61.36	59.18
Os06t0137500-02	Rice	nucleus	61.08	54.85
CDY72499	Canola	mitochondrion	12.5	43.14
CDY70768	Canola	plastid	28.41	35.09
GSMUA_Achr9P00390_001	Banana	mitochondrion, nucleus	15.06	26.11
CDY18814	Canola	cytosol	19.6	24.64
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane, plastid	8.81	20.67
TraesCS3B01G302100.1	Wheat	nucleus	26.7	17.5

Protein Annotations

EnsemblPlants:GSMUA_Achr8P13740_001	EnsemblPlants:GSMUA_Achr8T13740_001	EnsemblPlantsGene:GSMUA_Achr8G13740_001	Gene3D:3.40.50.10480	InterPro:Brix	InterPro:IPR007109
PANTHER:PTHR22734	PANTHER:PTHR22734:SF3	PFAM:PF04427	PFscan:PS50833	SMART:SM00879	SUPFAM:SSF52954
UniParc:UPI000296A944	UniProt:M0TQ77	MapMan:17.1.2.2.1.4	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G13740_001]

Coordinates

chr8:+:10508726..10516049

Molecular Weight (calculated)

41371.3 Da

IEP (calculated)

10.171

GRAVY (calculated)

-0.817

Length

352 amino acids

Sequence
(BLAST)

001: MGEEEERDPQ RLKRIAAAAY DYDNDPRWAE YWSNVLIPPH MAARSDVVDH FKRKFYQRFI TKKGTTLPSM IKNKEKRSVP PEKKVPRTIE NTREVDETVC
101: RPDDEELFAG NDADEFSQVL KQEVTPKILI TTNRFNSTRG PAFIQELLSV IPNAHYHKRG TYELKKIVEY AKNKDFTSVV VVHSNRREPD ALLIINLPDG
201: PTAHFKLSKF IIQTRYSMNH GNPTDHKPEL VLNNFTTRLG HRVGRMIQSL FPQDPNFRGR RVVTFHNQRD FIFFRHHRYI FEAKEKKDES MAKAAKSKNI
301: TQEKVIVRLQ ECGPRFTLKL RNLQHGTFDS NGGEYEWVHK PEMDTSRRRF FL

Best Arabidopsis Sequence Match ( AT4G01560.1 )
(BLAST)

001: MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL

Arabidopsis Description

MEE49AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.