Factsheet for TraesCS7D01G072700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G077100.1	Wheat	nucleus	99.72	99.72
TraesCS4A01G375600.1	Wheat	nucleus	99.72	99.72
HORVU7Hr1G018900.26	Barley	nucleus	95.51	93.15
Zm00001d011121_P001	Maize	nucleus, plasma membrane	79.78	78.89
EER89152	Sorghum	nucleus	80.06	78.73
GSMUA_Achr8P29700_001	Banana	nucleus	64.61	72.56
Os06t0137500-02	Rice	nucleus	78.37	71.17
AT4G01560.1	Thale cress	nucleus	68.26	70.85
Solyc11g066280.1.1	Tomato	nucleus	66.01	70.15
CDY07134	Canola	nucleus	67.98	69.34
CDY58227	Canola	nucleus	67.98	69.34
Bra036325.1-P	Field mustard	nucleus	67.98	69.14
VIT_07s0031g03160.t01	Wine grape	nucleus	66.29	68.21
VIT_14s0036g01520.t01	Wine grape	nucleus	66.01	67.92
KRH06320	Soybean	nucleus	69.1	67.77
PGSC0003DMT400001077	Potato	cytosol	67.42	67.61
KRH47743	Soybean	nucleus	68.54	67.22
GSMUA_Achr8P29710_001	Banana	plastid	64.33	66.38
GSMUA_Achr8P13740_001	Banana	nucleus	62.08	62.78
CDY72499	Canola	mitochondrion	12.64	44.12
CDY70768	Canola	plastid	30.34	37.89
TraesCS7D01G296800.1	Wheat	nucleus	26.97	32.76
CDY18814	Canola	cytosol	19.38	24.64
TraesCS3B01G302100.1	Wheat	nucleus	31.74	21.04

Protein Annotations

EnsemblPlants:TraesCS7D01G072700.1	EnsemblPlantsGene:TraesCS7D01G072700	Gene3D:3.40.50.10480	InterPro:Brix	InterPro:IPR007109	ncoils:Coil
PANTHER:PTHR22734	PANTHER:PTHR22734:SF3	PFAM:PF04427	PFscan:PS50833	SEG:seg	SMART:SM00879
SUPFAM:SSF52954	MapMan:17.1.2.2.1.4	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:42708880..42714235

Molecular Weight (calculated)

41634.7 Da

IEP (calculated)

10.513

GRAVY (calculated)

-1.071

Length

356 amino acids

Sequence
(BLAST)

001: MAREDRKRRQ PDGDEAADEG ERRGRRDKRP KEEKPAPPLP SEIRNKEKRS EVYAKLKREK KAQKRRLGRE RGQAAQRAAE LGEEVPEKQV PRTIENTREP
101: DETVCRPDDQ ELFAGNDADE FNAVLKQVVT PKVLITTCRF NSGRGPAFIK ELMQVIPNAQ YVNRGTYDLK KIVEYANNRE FTSVMVVHTN RREPDALLII
201: NLPEGPTAHF KLSKLVLRKD IKNHGNPTSH KPELALNNFT TRLGHRVGRM IQSLFPQDPN FRGRRVVTFH NQRDYIFFRH HRYIFEEKEK KIVSKDKKSK
301: GETKTEKQIN CRLQECGPRF TLKLLTLQHG TFDTKSGEYE WVHKPDLDTS RRRFFL

Best Arabidopsis Sequence Match ( AT4G01560.1 )
(BLAST)

001: MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL

Arabidopsis Description

MEE49AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.