Factsheet for Os06t0137500-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89152	Sorghum	nucleus	77.55	83.98
Zm00001d011121_P001	Maize	nucleus, plasma membrane	76.02	82.78
TraesCS7A01G077100.1	Wheat	nucleus	71.43	78.65
TraesCS4A01G375600.1	Wheat	nucleus	71.43	78.65
TraesCS7D01G072700.1	Wheat	nucleus	71.17	78.37
HORVU7Hr1G018900.26	Barley	nucleus	71.17	76.44
GSMUA_Achr8P29700_001	Banana	nucleus	56.38	69.72
Solyc11g066280.1.1	Tomato	nucleus	58.67	68.66
VIT_14s0036g01520.t01	Wine grape	nucleus	60.46	68.5
AT4G01560.1	Thale cress	nucleus	58.93	67.35
VIT_07s0031g03160.t01	Wine grape	nucleus	59.44	67.34
CDY07134	Canola	nucleus	59.44	66.76
CDY58227	Canola	nucleus	59.18	66.48
Bra036325.1-P	Field mustard	nucleus	59.18	66.29
KRH47743	Soybean	nucleus	60.71	65.56
GSMUA_Achr8P29710_001	Banana	plastid	57.4	65.22
PGSC0003DMT400001077	Potato	cytosol	58.93	65.07
KRH06320	Soybean	nucleus	60.2	65.01
GSMUA_Achr8P13740_001	Banana	nucleus	54.85	61.08
CDY72499	Canola	mitochondrion	11.48	44.12
CDY70768	Canola	plastid	27.81	38.25
Os08t0155000-01	Rice	nucleus	23.47	31.4
CDY18814	Canola	cytosol	18.62	26.07
TraesCS3B01G302100.1	Wheat	nucleus	27.81	20.3

Protein Annotations

MapMan:17.1.2.2.1.4	Gene3D:3.40.50.10480	EntrezGene:4340048	EMBL:AK072896	ProteinID:BAF18647.1	ProteinID:BAS96046.1
InterPro:Brix	ncoils:Coil	GO:GO:0000003	GO:GO:0000027	GO:GO:0000460	GO:GO:0000470
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009987	GO:GO:0016043	GO:GO:0030687	GO:GO:0042134	InterPro:IPR007109	EnsemblPlantsGene:Os06g0137500
EnsemblPlants:Os06t0137500-02	PFAM:PF04427	PFscan:PS50833	PANTHER:PTHR22734	PANTHER:PTHR22734:SF3	UniProt:Q0DES6
SMART:SM00879	SUPFAM:SSF52954	UniParc:UPI0000E12671	SEG:seg	:	:

Description

Similar to predicted protein. (Os06t0137500-01);Brix domain containing protein. (Os06t0137500-02)

Coordinates

chr6:-:2000872..2009052

Molecular Weight (calculated)

45578.0 Da

IEP (calculated)

10.459

GRAVY (calculated)

-0.873

Length

392 amino acids

Sequence
(BLAST)

001: MAKERKRRQP ADAPPPGDDD EGRDHRREKK PRKERPDPVL PSQIKNKDKR KEVHAKLKRE KKAQKRKLAR ERGQAAQRAV ELGEQPPEKL VPRTIENTRE
101: PDETVCRPDD QELFAGNDAD EFNAVLKQQT TPKVLITTCR FNSGRGPAFI EELMQVIPNS CYVKRGTYEL KKIVEYANNR DFTSLVVVHT NRREPDALLI
201: INLPAGPTAH FKLSKLILRK DIKNHGNPTS HKPELVLNNF TTRLGHRVGR MIQSLFPQEP NFRGRRVVTF HNQRDYIFFR HHRYIFEMKE NKIASKDKKA
301: KTSESKSQPE KQVICRLQEC GPRFTLKLLT LQHGTFDTKN GEYEWVHKMY HQICCHTKVV IIQLPWDYTS LFLPFSPSKN LSLLAPCSSR LL

Best Arabidopsis Sequence Match ( AT4G01560.1 )
(BLAST)

001: MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL

Arabidopsis Description

MEE49AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.