Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07134 | Canola | nucleus | 89.5 | 87.97 |
| CDY58227 | Canola | nucleus | 89.5 | 87.97 |
| Bra036325.1-P | Field mustard | nucleus | 89.5 | 87.71 |
| VIT_07s0031g03160.t01 | Wine grape | nucleus | 77.26 | 76.59 |
| VIT_14s0036g01520.t01 | Wine grape | nucleus | 76.97 | 76.3 |
| Solyc11g066280.1.1 | Tomato | nucleus | 72.59 | 74.33 |
| PGSC0003DMT400001077 | Potato | cytosol | 74.64 | 72.11 |
| KRH47743 | Soybean | nucleus | 76.09 | 71.9 |
| KRH06320 | Soybean | nucleus | 74.64 | 70.52 |
| TraesCS4A01G375600.1 | Wheat | nucleus | 71.14 | 68.54 |
| TraesCS7A01G077100.1 | Wheat | nucleus | 71.14 | 68.54 |
| GSMUA_Achr8P29700_001 | Banana | nucleus | 63.27 | 68.45 |
| TraesCS7D01G072700.1 | Wheat | nucleus | 70.85 | 68.26 |
| Zm00001d011121_P001 | Maize | nucleus, plasma membrane | 71.43 | 68.06 |
| EER89152 | Sorghum | nucleus | 71.72 | 67.96 |
| HORVU7Hr1G018900.26 | Barley | nucleus | 68.51 | 64.38 |
| GSMUA_Achr8P29710_001 | Banana | plastid | 62.97 | 62.61 |
| GSMUA_Achr8P13740_001 | Banana | nucleus | 60.64 | 59.09 |
| Os06t0137500-02 | Rice | nucleus | 67.35 | 58.93 |
| CDY72499 | Canola | mitochondrion | 13.41 | 45.1 |
| CDY70768 | Canola | plastid | 35.57 | 42.81 |
| AT1G63780.1 | Thale cress | mitochondrion, nucleus | 28.57 | 33.33 |
| Zm00001d051801_P002 | Maize | golgi | 21.57 | 27.51 |
| TraesCS3B01G302100.1 | Wheat | nucleus | 29.74 | 18.99 |
Protein Annotations
| MapMan:17.1.2.2.1.4 | Gene3D:3.40.50.10480 | EntrezGene:828136 | UniProt:A0A178V1M1 | ProteinID:AEE82042.1 | ArrayExpress:AT4G01560 |
| EnsemblPlantsGene:AT4G01560 | RefSeq:AT4G01560 | TAIR:AT4G01560 | RefSeq:AT4G01560-TAIR-G | EnsemblPlants:AT4G01560.1 | TAIR:AT4G01560.1 |
| EMBL:AY050341 | EMBL:AY086463 | Unigene:At.3828 | EMBL:BT020609 | InterPro:Brix | ProteinID:CAB77726.1 |
| GO:GO:0000003 | GO:GO:0000027 | GO:GO:0000460 | GO:GO:0000470 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0030687 | GO:GO:0042134 | InterPro:IPR007109 | Symbol:MEE49 | RefSeq:NP_567213.1 | ProteinID:OAO99603.1 |
| PFAM:PF04427 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PFscan:PS50833 | PANTHER:PTHR22734 | PANTHER:PTHR22734:SF3 | UniProt:Q9M125 | SMART:SM00879 |
| SUPFAM:SSF52954 | UniParc:UPI00000A4688 | SEG:seg | : | : | : |
Description
MEE49AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125]
Coordinates
chr4:-:676982..679276
Molecular Weight (calculated)
39849.8 Da
IEP (calculated)
10.361
GRAVY (calculated)
-0.875
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.