Factsheet for Bra036325.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58227	Canola	nucleus	99.71	100.0
CDY07134	Canola	nucleus	99.14	99.43
AT4G01560.1	Thale cress	nucleus	87.71	89.5
VIT_07s0031g03160.t01	Wine grape	nucleus	74.86	75.72
VIT_14s0036g01520.t01	Wine grape	nucleus	74.57	75.43
Solyc11g066280.1.1	Tomato	nucleus	71.14	74.33
PGSC0003DMT400001077	Potato	cytosol	73.43	72.39
KRH47743	Soybean	nucleus	74.0	71.35
KRH06320	Soybean	nucleus	72.29	69.7
TraesCS4A01G375600.1	Wheat	nucleus	69.43	68.26
TraesCS7A01G077100.1	Wheat	nucleus	69.43	68.26
GSMUA_Achr8P29700_001	Banana	nucleus	61.71	68.14
TraesCS7D01G072700.1	Wheat	nucleus	69.14	67.98
Zm00001d011121_P001	Maize	nucleus, plasma membrane	69.14	67.22
EER89152	Sorghum	nucleus	69.43	67.13
HORVU7Hr1G018900.26	Barley	nucleus	67.43	64.66
GSMUA_Achr8P29710_001	Banana	plastid	61.71	62.61
GSMUA_Achr8P13740_001	Banana	nucleus	60.29	59.94
Os06t0137500-02	Rice	nucleus	66.29	59.18
Bra027789.1-P	Field mustard	mitochondrion, nucleus	25.14	29.93
Zm00001d051801_P002	Maize	golgi	20.57	26.77
TraesCS3B01G302100.1	Wheat	nucleus	30.29	19.74

Protein Annotations

MapMan:17.1.2.2.1.4	Gene3D:3.40.50.10480	EnsemblPlantsGene:Bra036325	EnsemblPlants:Bra036325.1	EnsemblPlants:Bra036325.1-P	InterPro:Brix
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0007275	GO:GO:0008150	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	InterPro:IPR007109
UniProt:M4F5G9	PFAM:PF04427	PFscan:PS50833	PANTHER:PTHR22734	PANTHER:PTHR22734:SF3	SMART:SM00879
SUPFAM:SSF52954	UniParc:UPI000254207B	SEG:seg	:	:	:

Description

AT4G01560 (E=4e-159) MEE49 | MEE49 (maternal effect embryo arrest 49)

Coordinates

chrA09:+:576749..578947

Molecular Weight (calculated)

40609.6 Da

IEP (calculated)

10.412

GRAVY (calculated)

-0.896

Length

350 amino acids

Sequence
(BLAST)

001: MGFKRKKGDG DGEEMESEVR GRPSFNTAER RNVILPSMIK NKDKRAKVYA KQKHEKKVEK QKKIKARDAA EKQALELGEE PPQKMVPKTI ENTREADETV
101: CRPDDEELFA DIDADEFNPV LRREVTPKVL ITTCRFNSTR GPAFISELQS VIPNSDYRKR GTYDLKKIVE YAKKKDYTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHEPEL VLNNFTTRLG NRVGRFFQSL FPQEPNFRGR RVVTFHNQRD FIFFRHHRRY IFDVKEDKQS GAKGKDGVAK
301: ERVKPRLQEC GPSFTLKLVT LQHGTFDTKG GEFEWVHKPE MDTSRRRFFL

Best Arabidopsis Sequence Match ( AT4G01560.1 )
(BLAST)

001: MGFKRKKDDG DGEEMESDVR GKSTFSGGEK RNVILPSMIK NKDKRSKVYA KQKHEKKLEK QKKIRARDAA EKRALELGEE PPQKMIPKTI ENTRESDETV
101: CRPDDEELFA DIDADEFNPV LRREIAPKVL LTTCRFNSTR GPALISELLS VIPNSHYQKR GTYDLKKIVE YATKKDFTSL IVVHTNRREP DALLIIGLPN
201: GPTAHFKLSN LVLRKDIKNH GNPTSHQPEL VLNNFTTRLG NRVGRFFQSL FPPDPNFRGR RVVTFHNQRD FIFFRHHRYI FETKESKSDK GKEETIKPRL
301: QECGPRFTLK LVTLQHGTFD TKGGEFEWVH KPEMDTSRRR FFL

Arabidopsis Description

MEE49AT4g01560/F11O4_6 [Source:UniProtKB/TrEMBL;Acc:Q9M125]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.