Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g006160.2.1 | Tomato | mitochondrion | 80.0 | 75.0 |
| KRH45753 | Soybean | extracellular, nucleus | 93.33 | 48.28 |
| KRH69786 | Soybean | cytosol | 51.67 | 45.59 |
| VIT_01s0026g00620.t01 | Wine grape | extracellular | 80.0 | 44.44 |
| KRH54442 | Soybean | nucleus | 75.0 | 43.69 |
| KRH03355 | Soybean | extracellular | 76.67 | 40.0 |
| KRH57027 | Soybean | extracellular | 75.0 | 39.13 |
| KRH63474 | Soybean | extracellular, nucleus | 75.0 | 38.46 |
| KRH17433 | Soybean | extracellular | 61.67 | 37.37 |
| KRH05956 | Soybean | extracellular | 61.67 | 37.37 |
| KRG91811 | Soybean | extracellular | 60.0 | 37.11 |
| KRH34971 | Soybean | extracellular | 58.33 | 36.46 |
| KRH51705 | Soybean | extracellular | 60.0 | 36.0 |
| KRH61042 | Soybean | extracellular | 60.0 | 36.0 |
| KRH05955 | Soybean | extracellular | 61.67 | 34.91 |
| KRH34969 | Soybean | extracellular | 53.33 | 33.33 |
| KRH37871 | Soybean | extracellular | 56.67 | 30.36 |
| KRH07784 | Soybean | cytosol | 60.0 | 26.67 |
| KRH18589 | Soybean | extracellular | 75.0 | 24.73 |
| KRG93396 | Soybean | extracellular | 76.67 | 23.23 |
Protein Annotations
| EMBL:ACUP02011012 | EnsemblPlants:KRG99240 | EnsemblPlantsGene:GLYMA_18G1321001 | InterPro:GASA | PANTHER:PTHR23201 | PANTHER:PTHR23201:SF38 |
| PFAM:PF02704 | ProteinID:KRG99239.1 | ProteinID:KRG99240 | ProteinID:KRG99240.1 | UniParc:UPI0006ED556B | UniProt:A0A0R0F9R1 |
| MapMan:11.10.2.1.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:18529140..18529549
Molecular Weight (calculated)
6674.3 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.480
Length
60 amino acids
Sequence
(BLAST)
(BLAST)
1: CGARCRVRCS LHSRPKICSR ACGTCCFRCR CVPPGTYGNR EMCGKCYTDM ITHGNKPKCP
1: MAISKALIAS LLISLLVLQL VQADENSQKK NGYAKKIDCG SACVARCRLS RRPRLCHRAC GTCCYRCNCV PPGTYGNYDK CQCYASLTTH GGRRKCP
Arabidopsis Description
GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.