Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99240 | Soybean | cytosol | 34.91 | 61.67 |
| KRH07784 | Soybean | cytosol | 71.7 | 56.3 |
| KRH17433 | Soybean | extracellular | 51.89 | 55.56 |
| KRH05956 | Soybean | extracellular | 50.0 | 53.54 |
| KRH51705 | Soybean | extracellular | 49.06 | 52.0 |
| KRH69786 | Soybean | cytosol | 33.02 | 51.47 |
| KRH61042 | Soybean | extracellular | 47.17 | 50.0 |
| KRH34969 | Soybean | extracellular | 36.79 | 40.62 |
| KRH54442 | Soybean | nucleus | 38.68 | 39.81 |
| KRH34971 | Soybean | extracellular | 35.85 | 39.58 |
| KRG91811 | Soybean | extracellular | 35.85 | 39.18 |
| KRH57027 | Soybean | extracellular | 40.57 | 37.39 |
| KRH37871 | Soybean | extracellular | 38.68 | 36.61 |
| KRH45753 | Soybean | extracellular, nucleus | 39.62 | 36.21 |
| KRH63474 | Soybean | extracellular, nucleus | 38.68 | 35.04 |
| KRH03355 | Soybean | extracellular | 36.79 | 33.91 |
| KRH18589 | Soybean | extracellular | 41.51 | 24.18 |
| KRG93396 | Soybean | extracellular | 40.57 | 21.72 |
Protein Annotations
| EMBL:ACUP02010784 | EMBL:BT090148 | EnsemblPlants:KRH05955 | EnsemblPlantsGene:GLYMA_17G258100 | EntrezGene:100306171 | InterPro:GASA |
| PANTHER:PTHR23201 | PANTHER:PTHR23201:SF41 | PFAM:PF02704 | ProteinID:KRH05955 | ProteinID:KRH05955.1 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0001B1576D | UniProt:C6SYA1 | MapMan:11.10.2.1.1 | : | : |
Description
hypothetical protein
Coordinates
chr17:+:41212167..41213243
Molecular Weight (calculated)
11551.0 Da
IEP (calculated)
7.797
GRAVY (calculated)
-0.124
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIFKALLAS ILISLVIVNL VESDTMYQVI KNTVEGSSPS PSPPTIDCDV ECNRRCQLSS RPNLCKRACG TCCQRCNCVP SGTYGHYEEC SCYANMTTHG
101: GKHKCP
101: GKHKCP
1: MAISKALIAS LLISLLVLQL VQADVENSQK KNGYAKKIDC GSACVARCRL SRRPRLCHRA CGTCCYRCNC VPPGTYGNYD KCQCYASLTT HGGRRKCP
Arabidopsis Description
GASA1GASA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4S5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.