Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH01576 | Soybean | cytosol | 8.61 | 31.31 |
| KRG92960 | Soybean | nucleus | 8.33 | 30.61 |
| KRH67570 | Soybean | cytosol | 7.78 | 30.11 |
| KRH19744 | Soybean | cytosol | 7.78 | 29.17 |
| KRG95854 | Soybean | cytosol | 7.5 | 29.03 |
| KRH70528 | Soybean | nucleus | 8.61 | 27.43 |
| KRH36210 | Soybean | extracellular | 8.33 | 27.03 |
| KRG95131 | Soybean | nucleus | 21.39 | 22.71 |
| KRH66806 | Soybean | nucleus | 20.83 | 22.39 |
| KRG99379 | Soybean | cytosol | 6.11 | 21.57 |
| KRH45644 | Soybean | cytosol | 5.83 | 20.59 |
| KRG97168 | Soybean | nucleus | 19.44 | 19.55 |
| KRH06484 | Soybean | nucleus | 18.89 | 18.73 |
| KRH47919 | Soybean | nucleus | 18.33 | 18.38 |
Protein Annotations
| EMBL:ACUP02008131 | EMBL:BT094548 | EnsemblPlants:KRH18789 | EnsemblPlantsGene:GLYMA_13G082400 | EntrezGene:100806523 | InterPro:CHP01589_pln |
| PANTHER:PTHR31871 | PANTHER:PTHR31871:SF1 | PFAM:PF09713 | ProteinID:KRH18788.1 | ProteinID:KRH18789 | ProteinID:KRH18789.1 |
| TIGRFAMs:TIGR01589 | UniParc:UPI0001B16254 | UniProt:C6TAK9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr13:-:19195731..19202038
Molecular Weight (calculated)
39845.5 Da
IEP (calculated)
4.278
GRAVY (calculated)
-0.405
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGSVNRKH VTRKDVKRVQ ALIEHCLTQN MNKEEAVELI SQVEIEPNFI KLVWQKLEEE NQEFFKCYYA KMAWKQKMML LSIFSEEQGE ITGLTSSAPL
101: PTFDGSHNPA VSSQANCNVG LTTIPSSFPT FDGLHSPEVL SQPNSIFDGS HNPSFLSQPN SIAGLTPFAS LPTFDELHNP VDLSQPNFSF DGSDNLAVLS
201: QPNSNVDLTE IASLPNFDGS HNLAVLPQPN SNVDLTEIAP FPTFDGSHNS VVLSQPNSNM AHLPPLPYYT EEQIQASLMP TNMEQPIYSS SYDVFNNCGS
301: SLQTSMQGGA VDVSAYDKDN WISGPSSMLS DQSEDMGMIQ RINREMIESW PEYSGFHPLN
101: PTFDGSHNPA VSSQANCNVG LTTIPSSFPT FDGLHSPEVL SQPNSIFDGS HNPSFLSQPN SIAGLTPFAS LPTFDELHNP VDLSQPNFSF DGSDNLAVLS
201: QPNSNVDLTE IASLPNFDGS HNLAVLPQPN SNVDLTEIAP FPTFDGSHNS VVLSQPNSNM AHLPPLPYYT EEQIQASLMP TNMEQPIYSS SYDVFNNCGS
301: SLQTSMQGGA VDVSAYDKDN WISGPSSMLS DQSEDMGMIQ RINREMIESW PEYSGFHPLN
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSGLSPSQ YLIYSFLSRC SDVLACV
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSGLSPSQ YLIYSFLSRC SDVLACV
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.