Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0317g00020.t01 | Wine grape | nucleus | 71.43 | 75.27 |
| KRH01576 | Soybean | cytosol | 72.45 | 71.72 |
| KRH36210 | Soybean | extracellular | 80.61 | 71.17 |
| Bra007149.1-P | Field mustard | nucleus | 68.37 | 70.53 |
| VIT_14s0036g00440.t01 | Wine grape | nucleus | 69.39 | 68.69 |
| CDY53585 | Canola | cytosol | 36.73 | 67.92 |
| Bra014767.1-P | Field mustard | nucleus | 65.31 | 67.37 |
| AT3G28990.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 59.18 | 65.91 |
| KRH70528 | Soybean | nucleus | 75.51 | 65.49 |
| CDY20432 | Canola | cytosol | 52.04 | 64.56 |
| KRH19744 | Soybean | cytosol | 62.24 | 63.54 |
| KRG95854 | Soybean | cytosol | 60.2 | 63.44 |
| VIT_00s0317g00030.t01 | Wine grape | nucleus | 69.39 | 61.82 |
| KRH67570 | Soybean | cytosol | 58.16 | 61.29 |
| Solyc05g054750.2.1 | Tomato | cytosol | 55.1 | 60.0 |
| PGSC0003DMT400060454 | Potato | cytosol | 63.27 | 59.62 |
| KRH45644 | Soybean | cytosol | 42.86 | 41.18 |
| KRG99379 | Soybean | cytosol | 42.86 | 41.18 |
| KRH47919 | Soybean | nucleus | 40.82 | 11.14 |
| KRG97168 | Soybean | nucleus | 39.8 | 10.89 |
| KRH06484 | Soybean | nucleus | 39.8 | 10.74 |
| KRH66806 | Soybean | nucleus | 34.69 | 10.15 |
| KRG95131 | Soybean | nucleus | 34.69 | 10.03 |
| KRH18789 | Soybean | nucleus | 30.61 | 8.33 |
Protein Annotations
| EMBL:ACUP02012773 | EnsemblPlants:KRG92960 | EnsemblPlantsGene:GLYMA_20G240100 | EntrezGene:100800093 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF13 | PFAM:PF09713 | ProteinID:KRG92960 | ProteinID:KRG92960.1 | SEG:seg | TIGRFAMs:TIGR01589 |
| UniParc:UPI000233DE51 | UniProt:I1NJ57 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:47151093..47152860
Molecular Weight (calculated)
11349.5 Da
IEP (calculated)
6.097
GRAVY (calculated)
-0.689
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDSSSSSCP ASYIHMVQHL IEKCLIFHMT KEECMEALSK HANINPIITS TVWKELEKEN KEFFEAYMKS KAKDDRMSQE ETNQIIQKMI SESDSSKR
1: MADSSSASYI HMVQHMIEKC LIFHMSKEEC VEALSKHANI TPVITSTVWK ELEKENKEFF KAYEERQSKQ EQMSEEETNQ MIQKIISDSS KESDD
Arabidopsis Description
Uncharacterized protein At3g55240 [Source:UniProtKB/TrEMBL;Acc:Q9M3C7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.