Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66806 | Soybean | nucleus | 94.4 | 95.52 |
| VIT_08s0007g05400.t01 | Wine grape | mitochondrion, nucleus | 61.36 | 64.0 |
| PGSC0003DMT400076756 | Potato | nucleus | 55.46 | 60.26 |
| CDY08617 | Canola | mitochondrion, nucleus | 56.34 | 58.05 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 55.46 | 58.02 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 55.46 | 57.85 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 56.05 | 57.75 |
| Solyc10g079710.1.1 | Tomato | nucleus | 48.38 | 57.75 |
| CDY56714 | Canola | mitochondrion, nucleus | 55.75 | 57.62 |
| CDY41330 | Canola | mitochondrion, nucleus | 55.46 | 57.49 |
| CDY00915 | Canola | mitochondrion, nucleus | 56.05 | 57.23 |
| AT5G04090.6 | Thale cress | nucleus | 52.21 | 54.97 |
| Solyc01g005640.2.1 | Tomato | nucleus | 46.02 | 51.83 |
| GSMUA_Achr10P... | Banana | nucleus | 48.97 | 51.71 |
| GSMUA_Achr11P... | Banana | nucleus | 49.56 | 51.69 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 48.67 | 51.56 |
| PGSC0003DMT400081823 | Potato | nucleus | 48.08 | 51.26 |
| PGSC0003DMT400076729 | Potato | nucleus | 46.9 | 50.96 |
| Os02t0137100-01 | Rice | nucleus | 49.26 | 50.76 |
| Solyc10g079590.1.1 | Tomato | nucleus | 47.49 | 50.63 |
| KXG29427 | Sorghum | nucleus | 46.9 | 49.38 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 46.61 | 48.77 |
| TraesCS6D01G093800.1 | Wheat | nucleus | 46.31 | 48.46 |
| TraesCS7B01G313700.1 | Wheat | nucleus | 41.3 | 45.9 |
| TraesCS7A01G413700.1 | Wheat | nucleus | 41.0 | 45.57 |
| TraesCS7D01G407000.1 | Wheat | nucleus | 40.71 | 45.25 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 43.95 | 44.08 |
| EER90343 | Sorghum | nucleus | 35.4 | 41.67 |
| KRH19744 | Soybean | cytosol | 11.5 | 40.62 |
| KRH67570 | Soybean | cytosol | 10.62 | 38.71 |
| HORVU6Hr1G018770.3 | Barley | plastid | 46.31 | 38.29 |
| Zm00001d054004_P001 | Maize | nucleus | 38.35 | 38.12 |
| KRG95854 | Soybean | cytosol | 10.32 | 37.63 |
| KRH01576 | Soybean | cytosol | 10.91 | 37.37 |
| KRG92960 | Soybean | nucleus | 10.03 | 34.69 |
| KRH70528 | Soybean | nucleus | 11.5 | 34.51 |
| KRG99379 | Soybean | cytosol | 9.44 | 31.37 |
| KRG97168 | Soybean | nucleus | 33.04 | 31.28 |
| KRH47919 | Soybean | nucleus | 32.74 | 30.92 |
| KRH06484 | Soybean | nucleus | 33.04 | 30.85 |
| KRH45644 | Soybean | cytosol | 9.14 | 30.39 |
| KRH36210 | Soybean | extracellular | 9.73 | 29.73 |
| KRH18789 | Soybean | nucleus | 22.71 | 21.39 |
Protein Annotations
| EMBL:ACUP02012083 | EnsemblPlants:KRG95131 | EnsemblPlantsGene:GLYMA_19G132200 | EntrezGene:100813964 | InterPro:CHP01589_pln | PANTHER:PTHR31871 |
| PANTHER:PTHR31871:SF1 | PFAM:PF09713 | ProteinID:KRG95131 | ProteinID:KRG95131.1 | TIGRFAMs:TIGR01589 | UniParc:UPI000233E75C |
| UniProt:I1N8U1 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:39279609..39286603
Molecular Weight (calculated)
37096.2 Da
IEP (calculated)
4.595
GRAVY (calculated)
-0.396
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGSVRRVS RQDIQLVQNL IERCLQLYMS QKEVVETLLA QAKIEPGFTE LVWQKLEEEN EEFFKAYYAR LVLKQQIMQF NKLLDQQVQL MQLHSSTVAS
101: LPTSNGSHIP AVSSLPSSNG SHIPAIPENP ACYTADRTQT SLKPENMQHH VDSRLSNVFN NGGSSLHTSM HAAVDMSAHG NRINGPSSML SAQSANMGLI
201: QGINGGGMIK SEPGYSGCSP YMFGTDGNVL ETRPTIGGAS VTSFTNVESN SHSLNEVVLD PDTSSFGFLG QIPRNFSLSD LTADFSQSSA SYLTDILETY
301: SRSPFLATDN ENFLDRGEQD NNRLDSISEG LSYEDFGSE
101: LPTSNGSHIP AVSSLPSSNG SHIPAIPENP ACYTADRTQT SLKPENMQHH VDSRLSNVFN NGGSSLHTSM HAAVDMSAHG NRINGPSSML SAQSANMGLI
201: QGINGGGMIK SEPGYSGCSP YMFGTDGNVL ETRPTIGGAS VTSFTNVESN SHSLNEVVLD PDTSSFGFLG QIPRNFSLSD LTADFSQSSA SYLTDILETY
301: SRSPFLATDN ENFLDRGEQD NNRLDSISEG LSYEDFGSE
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.