Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g079590.1.1 | Tomato | nucleus | 93.59 | 91.82 |
| PGSC0003DMT400076756 | Potato | nucleus | 60.58 | 60.58 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 51.28 | 48.63 |
| CDY08617 | Canola | mitochondrion, nucleus | 50.96 | 48.33 |
| AT3G10250.5 | Thale cress | mitochondrion, nucleus | 50.0 | 48.15 |
| CDY00915 | Canola | mitochondrion, nucleus | 50.64 | 47.59 |
| CDY56714 | Canola | mitochondrion, nucleus | 49.68 | 47.26 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 49.04 | 47.08 |
| KRG95131 | Soybean | nucleus | 50.96 | 46.9 |
| KRH66806 | Soybean | nucleus | 50.32 | 46.87 |
| CDY41330 | Canola | mitochondrion, nucleus | 49.04 | 46.79 |
| AT5G04090.6 | Thale cress | nucleus | 46.47 | 45.03 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 45.51 | 44.38 |
| GSMUA_Achr11P... | Banana | nucleus | 45.83 | 44.0 |
| PGSC0003DMT400081823 | Potato | nucleus | 43.91 | 43.08 |
| GSMUA_Achr10P... | Banana | nucleus | 43.91 | 42.68 |
| KXG29427 | Sorghum | nucleus | 43.91 | 42.55 |
| Os02t0137100-01 | Rice | nucleus | 44.23 | 41.95 |
| TraesCS7D01G407000.1 | Wheat | nucleus | 40.38 | 41.31 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 42.63 | 41.05 |
| TraesCS6D01G093800.1 | Wheat | nucleus | 42.31 | 40.74 |
| TraesCS7B01G313700.1 | Wheat | nucleus | 39.74 | 40.66 |
| PGSC0003DMT400061428 | Potato | nucleus | 12.82 | 39.22 |
| TraesCS7A01G413700.1 | Wheat | nucleus | 37.82 | 38.69 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 40.06 | 36.98 |
| Zm00001d054004_P001 | Maize | nucleus | 39.1 | 35.78 |
| EER90343 | Sorghum | nucleus | 32.37 | 35.07 |
| HORVU6Hr1G018770.3 | Barley | plastid | 42.95 | 32.68 |
| PGSC0003DMT400060454 | Potato | cytosol | 9.94 | 29.81 |
| PGSC0003DMT400024865 | Potato | nucleus | 33.65 | 28.46 |
| PGSC0003DMT400035154 | Potato | cytosol | 9.29 | 28.43 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076729 | EnsemblPlantsGene:PGSC0003DMG400029840 | EntrezGene:102584182 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF1 |
| PFAM:PF09713 | PGSC:PGSC0003DMG400029840 | RefSeq:XP_006351392.1 | TIGRFAMs:TIGR01589 | UniParc:UPI00029501B3 | UniProt:M1CXA8 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029840]
Coordinates
chr10:+:58232201..58236266
Molecular Weight (calculated)
34663.2 Da
IEP (calculated)
4.206
GRAVY (calculated)
-0.498
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGEQVRKIT REDIQLVQNL IERCLQLYMN QKETVDTLLH QAKIQPSFTE FVWQRLEEEN HEFFRAYYTR LIVKDQITRF NELLERQAES MRMYATESVP
101: VSNGSQIQPV AQNSTFQATE HAEPNVKLAN MHPTVNGNLP HVYTNGASSV QSYAQAAMDV SAHARSIDLS PNMLLPQHAN LGLMQGPNGG MINSAGYSGN
201: NGGEGILQQA RPGVGNSYVE PSVQPVIEDP WGVDTSSFGF LGKIPRNFSF SDLTADFPNT SEILEGYSGS AFLATDTNDF LDPQDRGEQE NQAIDELDTI
301: SEDVSFDDLC SD
101: VSNGSQIQPV AQNSTFQATE HAEPNVKLAN MHPTVNGNLP HVYTNGASSV QSYAQAAMDV SAHARSIDLS PNMLLPQHAN LGLMQGPNGG MINSAGYSGN
201: NGGEGILQQA RPGVGNSYVE PSVQPVIEDP WGVDTSSFGF LGKIPRNFSF SDLTADFPNT SEILEGYSGS AFLATDTNDF LDPQDRGEQE NQAIDELDTI
301: SEDVSFDDLC SD
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Arabidopsis Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.