Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41330 | Canola | mitochondrion, nucleus | 89.2 | 88.38 |
| Bra034101.1-P | Field mustard | mitochondrion, nucleus | 88.58 | 88.31 |
| CDY56714 | Canola | mitochondrion, nucleus | 88.58 | 87.5 |
| Bra029826.1-P | Field mustard | mitochondrion, nucleus | 88.58 | 87.23 |
| CDY08617 | Canola | mitochondrion, nucleus | 87.65 | 86.32 |
| CDY00915 | Canola | mitochondrion, nucleus | 88.27 | 86.14 |
| AT5G04090.6 | Thale cress | nucleus | 68.83 | 69.25 |
| VIT_08s0007g05400.t01 | Wine grape | mitochondrion, nucleus | 60.49 | 60.31 |
| KRH66806 | Soybean | nucleus | 58.95 | 57.01 |
| KRG95131 | Soybean | nucleus | 58.02 | 55.46 |
| PGSC0003DMT400076756 | Potato | nucleus | 52.16 | 54.17 |
| Solyc10g079710.1.1 | Tomato | nucleus | 44.75 | 51.06 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 50.47 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 49.69 | 50.31 |
| PGSC0003DMT400076729 | Potato | nucleus | 48.15 | 50.0 |
| GSMUA_Achr11P... | Banana | nucleus | 49.69 | 49.54 |
| Os02t0137100-01 | Rice | nucleus | 50.0 | 49.24 |
| KXG29427 | Sorghum | nucleus | 48.77 | 49.07 |
| Solyc10g079590.1.1 | Tomato | nucleus | 47.84 | 48.74 |
| Solyc01g005640.2.1 | Tomato | nucleus | 45.06 | 48.51 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 47.84 | 47.84 |
| TraesCS7B01G313700.1 | Wheat | nucleus | 44.75 | 47.54 |
| TraesCS7D01G407000.1 | Wheat | nucleus | 44.75 | 47.54 |
| TraesCS6D01G093800.1 | Wheat | nucleus | 47.53 | 47.53 |
| TraesCS7A01G413700.1 | Wheat | nucleus | 44.44 | 47.21 |
| PGSC0003DMT400081823 | Potato | nucleus | 45.99 | 46.86 |
| TraesCS6B01G134100.4 | Wheat | extracellular | 45.37 | 43.49 |
| EER90343 | Sorghum | nucleus | 37.04 | 41.67 |
| AT3G55240.1 | Thale cress | nucleus | 11.73 | 40.0 |
| Zm00001d054004_P001 | Maize | nucleus | 41.67 | 39.59 |
| HORVU6Hr1G018770.3 | Barley | plastid | 48.15 | 38.05 |
| AT3G28990.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 10.19 | 37.5 |
| AT5G02580.1 | Thale cress | cytosol | 10.19 | 36.26 |
| AT3G61700.2 | Thale cress | nucleus | 34.88 | 31.04 |
| AT2G46420.3 | Thale cress | nucleus | 34.57 | 30.85 |
| AT1G10657.1 | Thale cress | cytosol | 8.64 | 22.4 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820187 | UniProt:A0A178V7C3 | ProteinID:AEE74877.1 | ProteinID:AEE74878.1 | EMBL:AK317093 |
| ProteinID:ANM65879.1 | ProteinID:ANM65880.1 | ArrayExpress:AT3G10250 | EnsemblPlantsGene:AT3G10250 | RefSeq:AT3G10250 | TAIR:AT3G10250 |
| RefSeq:AT3G10250-TAIR-G | EnsemblPlants:AT3G10250.5 | EMBL:AY054259 | EMBL:AY079118 | EMBL:AY084385 | Unigene:At.18434 |
| InterPro:CHP01589_pln | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016874 | RefSeq:NP_001327816.1 | RefSeq:NP_001327817.1 |
| RefSeq:NP_566370.1 | RefSeq:NP_974271.1 | ProteinID:OAP02160.1 | PFAM:PF09713 | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF1 |
| UniProt:Q940M5 | TIGRFAMs:TIGR01589 | UniParc:UPI000005EAE5 | SEG:seg | : | : |
Description
AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
Coordinates
chr3:-:3167951..3170931
Molecular Weight (calculated)
36380.5 Da
IEP (calculated)
4.951
GRAVY (calculated)
-0.607
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.