Factsheet for HORVU6Hr1G018770.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G093800.1	Wheat	nucleus	76.59	96.91
TraesCS6A01G104900.1	Wheat	nucleus	76.59	96.91
TraesCS6B01G134100.4	Wheat	extracellular	72.93	88.46
Os02t0137100-01	Rice	nucleus	64.39	80.24
KXG29427	Sorghum	nucleus	61.71	78.57
Zm00001d054004_P001	Maize	nucleus	52.2	62.76
GSMUA_Achr11P...	Banana	nucleus	46.1	58.15
GSMUA_Achr10P...	Banana	nucleus	44.15	56.39
GSMUA_Achr1P08340_001	Banana	cytosol	43.9	56.25
VIT_08s0007g05400.t01	Wine grape	mitochondrion, nucleus	38.29	48.31
AT3G10250.5	Thale cress	mitochondrion, nucleus	38.05	48.15
KRH66806	Soybean	nucleus	38.54	47.16
Bra029826.1-P	Field mustard	mitochondrion, nucleus	37.8	47.11
CDY08617	Canola	mitochondrion, nucleus	37.56	46.81
PGSC0003DMT400076756	Potato	nucleus	35.37	46.47
KRG95131	Soybean	nucleus	38.29	46.31
CDY56714	Canola	mitochondrion, nucleus	36.34	45.43
CDY41330	Canola	mitochondrion, nucleus	36.1	45.26
Bra034101.1-P	Field mustard	mitochondrion, nucleus	35.85	45.23
CDY00915	Canola	mitochondrion, nucleus	36.34	44.88
AT5G04090.6	Thale cress	nucleus	34.15	43.48
PGSC0003DMT400076729	Potato	nucleus	32.68	42.95
PGSC0003DMT400081823	Potato	nucleus	33.17	42.77
Solyc01g005640.2.1	Tomato	nucleus	30.98	42.19
Solyc10g079590.1.1	Tomato	nucleus	32.68	42.14
Solyc10g079710.1.1	Tomato	nucleus	29.02	41.9
HORVU4Hr1G023250.1	Barley	extracellular	6.83	32.18
HORVU3Hr1G087010.1	Barley	cytosol, nucleus, plastid	7.8	32.0
HORVU1Hr1G071910.1	Barley	cytosol	7.07	29.0
HORVU4Hr1G058560.1	Barley	cytosol	7.07	23.39

Protein Annotations

EnsemblPlants:HORVU6Hr1G018770.3	EnsemblPlantsGene:HORVU6Hr1G018770	InterPro:CHP01589_pln	PANTHER:PTHR31871	PANTHER:PTHR31871:SF1	PFAM:PF09713
SEG:seg	TIGRFAMs:TIGR01589	UniParc:UPI000B4761B4	UniProt:A0A287THM5	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr6H:-:48592565..48598170

Molecular Weight (calculated)

44217.2 Da

IEP (calculated)

5.037

GRAVY (calculated)

-0.530

Length

410 amino acids

Sequence
(BLAST)

001: IHPSIDNPNG LTSRSSKQTK TNAPAPASRS CRRPHHRDPI IHARARAQPL APPGLDVVRA SLPAGRPEER RGAERSGARL ARAGGGMSGG EEGEGRKVSR
101: EDIQLVQNLI ERCLQLYMNQ KEVVGTLSFQ AKIEPSFTEL VWQKLEEENP EFFKAYYVRL MLKNQILVFN KLLAHQGRLM NKDPSGALSV TPTAPNGSDS
201: STLNQNTCFL QDTTSTAIPD SFLHNGSSSG VINGAPATEQ FIYGGKVVHG LPSGMDASVS LLSAHNSTGG QFNGDNGTTI KAESSYSSNP EFAFCNENTY
301: LEPCQSIGDA SGGSFSSSEL NGQPLGDPIL DMDTSSYGFL SQIPRNFSFS DLTEDFSHST EILENYGRSP FIPSETNNFS ESTAGGHTEI GNIRLDSISE
401: AVSYEDFGSD

Best Arabidopsis Sequence Match ( AT3G10250.2 )
(BLAST)

001: MSSGTVRRVS RQDIQLVQNL IERCLQLYMN QKEVVDTLLE QAKIEPGFTE LVWQKLEEEN REFFKAYYLR LMVKHQIMEF NKLLEQQVHH MRQMHPTGVA
101: SVQNTNGSHL QSMNQKQLCY PSEHTDQSLK SESAHHPMAS SLSNAFLNGS STLNTNVPSS INISTHARRV DASPNMLSSQ TTNMPMMQGM NGGMIKSETA
201: FTNPASFMYG GERNALEGHS AVGDTSIPNF SNESNNQPLS DPLLEAEAST FGFLGQIPRN FSLSDLTADF SQSSEILESY DRSPFLVPNA ENFLDSRDRG
301: EYQGDNKRLD TISEGFSYDN IGSE

Arabidopsis Description

AT3G10250 protein [Source:UniProtKB/TrEMBL;Acc:Q940M5]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.