Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G287200.1 | Wheat | cytosol | 94.0 | 94.95 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 93.0 | 94.9 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 93.0 | 94.9 |
| Os05t0462000-00 | Rice | cytosol | 90.0 | 88.24 |
| EES19655 | Sorghum | cytosol | 86.0 | 84.31 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 80.0 | 80.81 |
| KRH67570 | Soybean | cytosol | 60.0 | 64.52 |
| KRG95854 | Soybean | cytosol | 60.0 | 64.52 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 62.0 | 63.92 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 61.0 | 63.54 |
| GSMUA_Achr10P... | Banana | cytosol | 59.0 | 63.44 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 59.0 | 62.77 |
| Bra005731.1-P | Field mustard | cytosol | 57.0 | 62.64 |
| CDY11219 | Canola | cytosol | 57.0 | 62.64 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 57.0 | 62.64 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.0 | 62.03 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 60.0 | 61.86 |
| AT5G02580.1 | Thale cress | cytosol | 55.0 | 60.44 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 34.0 | 58.62 |
| PGSC0003DMT400061428 | Potato | nucleus | 59.0 | 57.84 |
| CDY72004 | Canola | extracellular | 32.0 | 56.14 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 56.0 | 56.0 |
| KRH19744 | Soybean | cytosol | 53.0 | 55.21 |
| Solyc09g005730.2.1 | Tomato | nucleus | 55.0 | 53.4 |
| HORVU4Hr1G023250.1 | Barley | extracellular | 44.0 | 50.57 |
| Solyc10g084600.1.1 | Tomato | nucleus | 55.0 | 50.46 |
| HORVU4Hr1G058560.1 | Barley | cytosol | 50.0 | 40.32 |
| HORVU6Hr1G018770.3 | Barley | plastid | 29.0 | 7.07 |
Protein Annotations
| EMBL:AK361773 | EnsemblPlants:HORVU1Hr1G071910.1 | EnsemblPlantsGene:HORVU1Hr1G071910 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 |
| PFAM:PF09713 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI0002005E2F | UniProt:F2DD06 | MapMan:35.2 |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DD06]
Coordinates
chrchr1H:+:495399707..495401012
Molecular Weight (calculated)
11435.4 Da
IEP (calculated)
4.800
GRAVY (calculated)
-0.740
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDSSSSSAS YIRMVHHLIE KCICFNLNKE GCMEALEKHA KINPVVTSTV WKELEKENKE FFESYNKDRV ERNIEAETME RIQKMLTDAA ASKSSDDDEG
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.