Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G286100.1 | Wheat | cytosol | 98.99 | 100.0 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 98.99 | 100.0 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 94.95 | 94.0 |
| Os05t0462000-00 | Rice | cytosol | 88.89 | 86.27 |
| EES19655 | Sorghum | cytosol | 85.86 | 83.33 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 76.77 | 76.77 |
| KRG95854 | Soybean | cytosol | 60.61 | 64.52 |
| KRH67570 | Soybean | cytosol | 60.61 | 64.52 |
| Bra005731.1-P | Field mustard | cytosol | 57.58 | 62.64 |
| CDY11219 | Canola | cytosol | 57.58 | 62.64 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 57.58 | 62.64 |
| GSMUA_Achr9P03160_001 | Banana | cytosol | 49.49 | 62.03 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 58.59 | 61.7 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 59.6 | 61.46 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 58.59 | 61.05 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 59.6 | 60.82 |
| AT5G02580.1 | Thale cress | cytosol | 55.56 | 60.44 |
| GSMUA_Achr10P... | Banana | cytosol | 55.56 | 59.14 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 56.57 | 57.73 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 32.32 | 55.17 |
| PGSC0003DMT400061428 | Potato | nucleus | 56.57 | 54.9 |
| CDY72004 | Canola | extracellular | 31.31 | 54.39 |
| KRH19744 | Soybean | cytosol | 50.51 | 52.08 |
| Solyc09g005730.2.1 | Tomato | nucleus | 52.53 | 50.49 |
| Solyc10g084600.1.1 | Tomato | nucleus | 52.53 | 47.71 |
| TraesCS4A01G101700.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 50.51 | 34.97 |
| TraesCS7A01G413700.1 | Wheat | nucleus | 29.29 | 9.51 |
| TraesCS6A01G104900.1 | Wheat | nucleus | 30.3 | 9.26 |
| TraesCS3A01G104000.1 | Wheat | unclear | 33.33 | 9.19 |
| TraesCS3A01G144700.2 | Wheat | nucleus | 33.33 | 9.09 |
| TraesCS1A01G126500.1 | Wheat | cytosol, nucleus, plastid | 22.22 | 7.67 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G287200.1 | EnsemblPlantsGene:TraesCS1A01G287200 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 | PFAM:PF09713 |
| SEG:seg | TIGRFAMs:TIGR01589 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:483927993..483928913
Molecular Weight (calculated)
11302.3 Da
IEP (calculated)
4.963
GRAVY (calculated)
-0.666
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDSSSSASY IRMVHHLIEK CICFNLNKEG CMEALEKHAK INPVVTATVW KELEKENKEF FESYNRDRVE RNIEAATMER IQKMLSDAAA SKTSDDDEG
1: MGDHNSSQAS YIHLVHHLIE ECIVFNMGKE ECMDALFKHA NIKPIITSTV WKELAKENKE FFEAYERRRE EIPTEKETAR RIRDLLSRTT I
Arabidopsis Description
Argininosuccinate lyase [Source:UniProtKB/TrEMBL;Acc:Q84TG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.