Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P03160_001 | Banana | cytosol | 56.99 | 67.09 |
| GSMUA_Achr2P16150_001 | Banana | cytosol | 63.44 | 61.46 |
| HORVU1Hr1G071910.1 | Barley | cytosol | 63.44 | 59.0 |
| GSMUA_Achr9P28360_001 | Banana | cytosol | 60.22 | 57.73 |
| GSMUA_Achr4P30540_001 | Banana | cytosol, nucleus, plastid | 60.22 | 57.73 |
| VIT_08s0040g02650.t01 | Wine grape | nucleus | 58.06 | 57.45 |
| TraesCS1B01G296600.1 | Wheat | cytosol | 59.14 | 56.12 |
| TraesCS1D01G286100.1 | Wheat | cytosol | 59.14 | 56.12 |
| KRH67570 | Soybean | cytosol | 55.91 | 55.91 |
| KRG95854 | Soybean | cytosol | 55.91 | 55.91 |
| Os05t0462000-00 | Rice | cytosol | 61.29 | 55.88 |
| TraesCS1A01G287200.1 | Wheat | cytosol | 59.14 | 55.56 |
| KRH19744 | Soybean | cytosol | 56.99 | 55.21 |
| VIT_00s0317g00010.t01 | Wine grape | cytosol | 34.41 | 55.17 |
| TraesCS3A01G355400.1 | Wheat | cytosol, nucleus, plastid | 55.91 | 54.74 |
| EES19655 | Sorghum | cytosol | 59.14 | 53.92 |
| TraesCS3D01G349400.1 | Wheat | cytosol, nucleus, plastid | 54.84 | 53.68 |
| TraesCS3B01G388300.1 | Wheat | cytosol, nucleus, plastid | 54.84 | 53.12 |
| Bra005731.1-P | Field mustard | cytosol | 51.61 | 52.75 |
| CDY11219 | Canola | cytosol | 51.61 | 52.75 |
| CDX80829 | Canola | cytosol, nucleus, peroxisome | 51.61 | 52.75 |
| AT5G02580.1 | Thale cress | cytosol | 50.54 | 51.65 |
| Zm00001d038387_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 54.84 | 51.52 |
| GSMUA_Achr7P15290_001 | Banana | cytosol | 43.01 | 51.28 |
| PGSC0003DMT400061428 | Potato | nucleus | 55.91 | 50.98 |
| CDY72004 | Canola | extracellular | 31.18 | 50.88 |
| HORVU3Hr1G087010.1 | Barley | cytosol, nucleus, plastid | 53.76 | 50.0 |
| Os01t0837600-01 | Rice | cytosol, nucleus, plastid | 52.69 | 48.04 |
| Solyc09g005730.2.1 | Tomato | nucleus | 52.69 | 47.57 |
| Zm00001d012431_P001 | Maize | cytosol, nucleus, plastid | 51.61 | 46.6 |
| Solyc10g084600.1.1 | Tomato | nucleus | 51.61 | 44.04 |
| EES01725 | Sorghum | cytosol, nucleus, plastid | 58.06 | 31.58 |
| Zm00001d042940_P001 | Maize | nucleus | 52.69 | 25.65 |
| GSMUA_Achr10P... | Banana | nucleus | 41.94 | 12.15 |
| GSMUA_Achr1P08340_001 | Banana | cytosol | 40.86 | 11.88 |
| GSMUA_Achr11P... | Banana | nucleus | 39.78 | 11.38 |
| GSMUA_Achr7P14110_001 | Banana | nucleus | 40.86 | 10.53 |
| GSMUA_Achr6P05700_001 | Banana | nucleus | 38.71 | 10.26 |
| GSMUA_Achr10P... | Banana | nucleus | 39.78 | 10.25 |
| GSMUA_Achr6P14310_001 | Banana | nucleus | 36.56 | 9.19 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P03740_001 | EnsemblPlants:GSMUA_Achr10T03740_001 | EnsemblPlantsGene:GSMUA_Achr10G03740_001 | InterPro:CHP01589_pln | PANTHER:PTHR31871 | PANTHER:PTHR31871:SF2 |
| PFAM:PF09713 | SEG:seg | TIGRFAMs:TIGR01589 | UniParc:UPI000296ABFA | UniProt:M0RF51 | MapMan:35.2 |
Description
plant-specific domain TIGR01589 family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G03740_001]
Coordinates
chr10:+:12141750..12142814
Molecular Weight (calculated)
10668.7 Da
IEP (calculated)
4.235
GRAVY (calculated)
-0.486
Length
93 amino acids
Sequence
(BLAST)
(BLAST)
1: MGDSSSPASY IRMVQLLIEK CLIFHMNKDE CVEALSKHAA IDPVITSTVW TELEKENKEF FEAYSKNREG SVMEMMREMV TEMASRDPED DEG
1: MADSSSASYI HMVQHMIEKC LIFHMSKEEC VEALSKHANI TPVITSTVWK ELEKENKEFF KAYEERQSKQ EQMSEEETNQ MIQKIISDSS KESDD
Arabidopsis Description
Uncharacterized protein At3g55240 [Source:UniProtKB/TrEMBL;Acc:Q9M3C7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.